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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: GJA1

Summary for GJA1

Gene informationGene symbol

GJA1

Ensembl ID

ENSG00000152661

Entrez ID

2697

Gene namegap junction protein alpha 1
SynonymsCX43|GJAL|ODD|ODDD|ODOD|SDTY3
Gene typeprotein_coding
UniProtAcc

P17302


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Dataset with differentially expressed gene: GJA1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-1.006140.00e+00

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Expression of GJA1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to GJA1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating GJA1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
GJA1hsa-miR-454-3p99.5264NM_000165
GJA1hsa-miR-301b-3p99.5122NM_000165
GJA1hsa-miR-429599.5122NM_000165
GJA1hsa-miR-130b-3p99.5122NM_000165
GJA1hsa-miR-301a-3p99.5122NM_000165
GJA1hsa-miR-366699.5122NM_000165
GJA1hsa-miR-130a-3p99.5122NM_000165
GJA1hsa-miR-1-3p99.4646NM_000165
GJA1hsa-miR-20699.4646NM_000165
GJA1hsa-miR-61399.3113NM_000165
GJA1hsa-miR-367196.1578NM_000165
GJA1hsa-miR-892a96.1162NM_000165
GJA1hsa-miR-60795.2248NM_000165
GJA1hsa-miR-4423-3p94.8522NM_000165
GJA1hsa-miR-33a-3p94.6257NM_000165
GJA1hsa-miR-1212594.5491NM_000165
GJA1hsa-miR-4680-3p94.2024NM_000165
GJA1hsa-miR-314894.1477NM_000165
GJA1hsa-miR-19b-3p93.9675NM_000165
GJA1hsa-miR-19a-3p93.9675NM_000165
GJA1hsa-miR-101-3p93.5474NM_000165
GJA1hsa-miR-7109-3p92.4949NM_000165
GJA1hsa-miR-519c-3p92.2289NM_000165
GJA1hsa-miR-519a-3p92.2289NM_000165
GJA1hsa-miR-519b-3p92.2289NM_000165
GJA1hsa-miR-498-5p92.2066NM_000165
GJA1hsa-miR-513b-3p92.0417NM_000165
GJA1hsa-miR-4724-3p91.8273NM_000165
GJA1hsa-miR-3613-3p90.8963NM_000165
GJA1hsa-miR-579-3p90.7013NM_000165
GJA1hsa-miR-664b-3p90.7013NM_000165
GJA1hsa-miR-4666a-5p90.6782NM_000165
GJA1hsa-miR-464490.462NM_000165
GJA1hsa-miR-430690.462NM_000165
GJA1hsa-miR-30a-5p90.0497NM_000165
GJA1hsa-miR-30c-5p90.0497NM_000165
GJA1hsa-miR-30b-5p90.0497NM_000165
GJA1hsa-miR-30d-5p90.0497NM_000165
GJA1hsa-miR-30e-5p90.0497NM_000165
GJA1hsa-let-7c-3p89.8187NM_000165
GJA1hsa-miR-676-5p89.6718NM_000165
GJA1hsa-miR-313389.1305NM_000165
GJA1hsa-miR-186-5p89.0615NM_000165
GJA1hsa-miR-664a-3p88.6642NM_000165
GJA1hsa-miR-23a-3p87.2647NM_000165
GJA1hsa-miR-23b-3p87.2647NM_000165
GJA1hsa-miR-23c87.2647NM_000165
GJA1hsa-miR-5582-3p87.2111NM_000165
GJA1hsa-miR-185-5p87.065NM_000165
GJA1hsa-miR-205-3p86.955NM_000165
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Motifs and transcription factors (TFs) regulating GJA1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
GJA1metacluster_135.11NR2C2 (directAnnotation).
GJA1kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
GJA1metacluster_160.20JUND; PRDM15 (directAnnotation).
GJA1metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
GJA1jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
GJA1metacluster_61.1DEAF1; DEAF1 (directAnnotation).
GJA1kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
GJA1transfac_pro__M02844BCL6B (inferredBy_Orthology).
GJA1metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
GJA1transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
GJA1transfac_pro__M03806ZBTB7C (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
GJA1"Carvedilol"

DB01136

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."