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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: GEM

Summary for GEM

Gene informationGene symbol

GEM

Ensembl ID

ENSG00000164949

Entrez ID

2669

Gene nameGTP binding protein overexpressed in skeletal muscle
SynonymsKIR
Gene typeprotein_coding
UniProtAcc

P55040


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Dataset with differentially expressed gene: GEM

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells0.8309841.71e-05

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD8+ T cells-0.4705120.00e+00

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD8+ T cells-0.7592980.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.6454784.49e-25

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Expression of GEM in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to GEM

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating GEM

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
GEMhsa-miR-5692a99.752NM_005261
GEMhsa-miR-64197.2728NM_181702
GEMhsa-miR-3617-5p97.2728NM_181702
GEMhsa-miR-50795.8075NM_181702
GEMhsa-miR-450b-5p95.0696NM_181702
GEMhsa-miR-522-3p94.5298NM_181702
GEMhsa-miR-224-3p94.5298NM_181702
GEMhsa-miR-55793.9687NM_181702
GEMhsa-miR-3121-3p93.5186NM_005261
GEMhsa-miR-1468-3p93.4453NM_181702
GEMhsa-miR-365893.4051NM_005261
GEMhsa-miR-367193.3003NM_181702
GEMhsa-miR-654-5p92.8992NM_181702
GEMhsa-miR-430792.4737NM_181702
GEMhsa-miR-60792.178NM_181702
GEMhsa-miR-366291.6429NM_005261
GEMhsa-miR-548aw91.277NM_181702
GEMhsa-miR-541-3p90.9153NM_181702
GEMhsa-miR-3680-3p90.7473NM_181702
GEMhsa-miR-10397-3p90.4222NM_005261
GEMhsa-miR-6878-3p88.9854NM_181702
GEMhsa-miR-447588.6842NM_181702
GEMhsa-miR-4668-5p88.1664NM_181702
GEMhsa-miR-29a-5p87.7789NM_181702
GEMhsa-miR-998587.7559NM_005261
GEMhsa-miR-27b-3p87.7559NM_005261
GEMhsa-miR-27a-3p87.7559NM_005261
GEMhsa-miR-4477a87.6071NM_181702
GEMhsa-miR-44887.0615NM_181702
GEMhsa-miR-4662a-3p86.0638NM_005261
GEMhsa-miR-805585.5612NM_005261
GEMhsa-miR-200c-3p84.8115NM_005261
GEMhsa-miR-42984.8115NM_005261
GEMhsa-miR-200b-3p84.8115NM_005261
GEMhsa-miR-3679-3p83.8626NM_181702
GEMhsa-miR-4694-3p82.6221NM_005261
GEMhsa-miR-227882.1698NM_181702
GEMhsa-miR-445282.146NM_181702
GEMhsa-miR-128-3p81.096NM_005261
GEMhsa-miR-216a-3p81.096NM_005261
GEMhsa-miR-1277-5p80.8478NM_005261
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Motifs and transcription factors (TFs) regulating GEM

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
GEMmetacluster_144.3ZNF704; ZNF704 (directAnnotation).
GEMcisbp__M00968MTF2 (directAnnotation).
GEMmetacluster_160.20JUND; PRDM15 (directAnnotation).
GEMkznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
GEMtransfac_pro__M05815ZNF613 (directAnnotation).
GEMmetacluster_2.9IRF2; IRF2; IRF2; PRDM1; PRDM1 (directAnnotation). PRDM1 (inferredBy_Orthology).
GEMtransfac_pro__M06557ZNF418 (directAnnotation).
GEMtfdimers__MD00465CRX; IKZF1 (directAnnotation).
GEMtransfac_pro__M01861ATF1 (directAnnotation).
GEMdbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
GEMdbtfbs__GMEB2_HepG2_ENCSR745VSQ_merged_N1GMEB2 (directAnnotation).
GEMmetacluster_111.3ATF1; ATF3; CREB1; CREB1; CREB1; CREB1; CREB1; CREM; CREM; CREM; CREM; E4F1; E4F1 (directAnnotation). CREB1; CREB1; CREM; JDP2 (inferredBy_Orthology).
GEMhocomoco__GMEB2_HUMAN.H11MO.0.DGMEB2 (directAnnotation).
GEMmetacluster_111.5E4F1; E4F1 (directAnnotation).
GEMmetacluster_148.1ATF2; ATF2; ATF3; ATF3; ATF3; ATF3; ATF4; ATF4; ATF6; ATF6; ATF6B; ATF7; BATF3; BATF3; CREB1; CREB1; CREB1; CREB3; CREB3; CREB5; CREB5; CREB5; CREM; CREM; FOS; FOS; FOSB; FOSB; FOSB; FOSL1; JDP2; JDP2; JUN; JUN; JUN; JUNB; JUND; MAF; MAF; MAFA; MAFA; MAFF; MAFF; MAFF; MAFF; MAFG; MAFG; ZBTB21 (directAnnotation). ATF1; ATF1; ATF1; ATF1; ATF6; ATF6; ATF6; ATF6; ATF6B; ATF6B; ATF6B; ATF6B; CREB1; CREB1; CREB3; CREB3; CREB3; CREB3; CREB3L1; CREB3L1; CREB3L1; CREB3L1; CREB3L2; CREB3L2; CREB3L2; CREB3L2; CREB3L3; CREB3L3; CREB3L3; CREB3L3; CREB3L4; CREB3L4; CREB3L4; CREB3L4; CREM; CREM; CREM; CREM; JDP2; JUN; JUNB; JUND; MAFB (inferredBy_Orthology).
GEMtransfac_public__M00039CREB1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."