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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: GATA6

Summary for GATA6

Gene informationGene symbol

GATA6

Ensembl ID

ENSG00000141448

Entrez ID

2627

Gene nameGATA binding protein 6
SynonymsNA
Gene typeprotein_coding
UniProtAcc

Q92908


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Dataset with differentially expressed gene: GATA6

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.9831470.00e+00

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Expression of GATA6 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to GATA6

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

GATA6

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating GATA6

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
GATA6hsa-miR-432597.599NM_005257
GATA6hsa-miR-5589-3p97.1745NM_005257
GATA6hsa-miR-130b-5p96.383NM_005257
GATA6hsa-miR-196a-5p96.1949NM_005257
GATA6hsa-miR-196b-5p96.1949NM_005257
GATA6hsa-miR-4802-3p95.751NM_005257
GATA6hsa-miR-4684-3p95.4619NM_005257
GATA6hsa-miR-128-3p95.3541NM_005257
GATA6hsa-miR-216a-3p95.3541NM_005257
GATA6hsa-miR-3681-3p95.1613NM_005257
GATA6hsa-miR-120094.6241NM_005257
GATA6hsa-miR-181a-5p94.3106NM_005257
GATA6hsa-miR-426294.3106NM_005257
GATA6hsa-miR-181d-5p94.3106NM_005257
GATA6hsa-miR-181b-5p94.3106NM_005257
GATA6hsa-miR-181c-5p94.3106NM_005257
GATA6hsa-miR-429994.2004NM_005257
GATA6hsa-miR-56894.1046NM_005257
GATA6hsa-miR-548an94.0592NM_005257
GATA6hsa-miR-612894.0478NM_005257
GATA6hsa-miR-6512-5p93.4888NM_005257
GATA6hsa-miR-452892.5939NM_005257
GATA6hsa-miR-545-5p92.2512NM_005257
GATA6hsa-miR-4677-5p92.1377NM_005257
GATA6hsa-miR-4691-3p92.0124NM_005257
GATA6hsa-miR-6832-3p91.9834NM_005257
GATA6hsa-miR-56791.9411NM_005257
GATA6hsa-miR-7-5p91.674NM_005257
GATA6hsa-miR-770390.398NM_005257
GATA6hsa-miR-4704-3p90.0307NM_005257
GATA6hsa-miR-607789.5652NM_005257
GATA6hsa-miR-27a-3p89.5515NM_005257
GATA6hsa-miR-27b-3p89.5515NM_005257
GATA6hsa-miR-998589.5515NM_005257
GATA6hsa-miR-372-5p89.0658NM_005257
GATA6hsa-miR-6768-3p89.0503NM_005257
GATA6hsa-miR-1212288.9023NM_005257
GATA6hsa-miR-316388.5457NM_005257
GATA6hsa-miR-432488.3187NM_005257
GATA6hsa-miR-6739-3p88.0761NM_005257
GATA6hsa-miR-32-5p88.0535NM_005257
GATA6hsa-miR-92b-3p88.0535NM_005257
GATA6hsa-miR-363-3p88.0535NM_005257
GATA6hsa-miR-92a-3p88.0535NM_005257
GATA6hsa-miR-25-3p88.0535NM_005257
GATA6hsa-miR-367-3p88.0535NM_005257
GATA6hsa-miR-124-3p87.2246NM_005257
GATA6hsa-miR-506-3p87.2246NM_005257
GATA6hsa-miR-10a-5p87.0037NM_005257
GATA6hsa-miR-10b-5p87.0037NM_005257
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Motifs and transcription factors (TFs) regulating GATA6

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
GATA6metacluster_160.20JUND; PRDM15 (directAnnotation).
GATA6cisbp__M00341PAX6 (directAnnotation).
GATA6jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
GATA6metacluster_151.2ZNF23 (directAnnotation).
GATA6transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
GATA6transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."