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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: GALNT1

Summary for GALNT1

Gene informationGene symbol

GALNT1

Ensembl ID

ENSG00000141429

Entrez ID

2589

Gene namepolypeptide N-acetylgalactosaminyltransferase 1
SynonymsGalNAc-T1
Gene typeprotein_coding
UniProtAcc

Q10472


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Dataset with differentially expressed gene: GALNT1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.6478740.00e+00

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells0.4910939.83e-12

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3903422.65e-26

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Expression of GALNT1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to GALNT1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating GALNT1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
GALNT1hsa-miR-58699.6235NM_020474
GALNT1hsa-miR-548c-3p98.3471NM_020474
GALNT1hsa-miR-570-3p97.5993NM_020474
GALNT1hsa-miR-10b-5p96.8378NM_020474
GALNT1hsa-miR-10a-5p96.8378NM_020474
GALNT1hsa-miR-9983-3p96.6409NM_020474
GALNT1hsa-miR-129-5p95.8661NM_020474
GALNT1hsa-miR-429195.7582NM_020474
GALNT1hsa-miR-5089-3p95.2469NM_020474
GALNT1hsa-miR-430394.0547NM_020474
GALNT1hsa-miR-548an93.885NM_020474
GALNT1hsa-miR-6867-5p93.3946NM_020474
GALNT1hsa-miR-6515-3p93.262NM_020474
GALNT1hsa-miR-873-5p93.1988NM_020474
GALNT1hsa-miR-2116-3p92.5096NM_020474
GALNT1hsa-miR-6732-3p92.3399NM_020474
GALNT1hsa-miR-651-5p92.307NM_020474
GALNT1hsa-miR-397392.0149NM_020474
GALNT1hsa-miR-7162-3p91.5944NM_020474
GALNT1hsa-miR-34a-3p91.495NM_020474
GALNT1hsa-miR-202-3p91.0437NM_020474
GALNT1hsa-miR-30c-5p90.9649NM_020474
GALNT1hsa-miR-30e-5p90.9649NM_020474
GALNT1hsa-miR-30a-5p90.9649NM_020474
GALNT1hsa-miR-30b-5p90.9649NM_020474
GALNT1hsa-miR-30d-5p90.9649NM_020474
GALNT1hsa-miR-314890.803NM_020474
GALNT1hsa-miR-568090.4387NM_020474
GALNT1hsa-miR-548ar-3p90.153NM_020474
GALNT1hsa-miR-1236-3p89.7263NM_020474
GALNT1hsa-miR-450089.1208NM_020474
GALNT1hsa-miR-16-2-3p88.8093NM_020474
GALNT1hsa-miR-195-3p88.8093NM_020474
GALNT1hsa-miR-891a-3p88.0847NM_020474
GALNT1hsa-miR-3688-5p88.0847NM_020474
GALNT1hsa-miR-144-3p87.4958NM_020474
GALNT1hsa-miR-101-3p87.4958NM_020474
GALNT1hsa-miR-548f-3p87.1132NM_020474
GALNT1hsa-miR-548a-3p87.1132NM_020474
GALNT1hsa-miR-548e-3p87.1132NM_020474
GALNT1hsa-miR-548az-3p87.1132NM_020474
GALNT1hsa-miR-548bc87.1132NM_020474
GALNT1hsa-miR-9-5p85.0575NM_020474
GALNT1hsa-miR-217-3p84.8442NM_020474
GALNT1hsa-miR-428684.6207NM_020474
GALNT1hsa-miR-5582-5p84.2582NM_020474
GALNT1hsa-miR-98-5p83.7516NM_020474
GALNT1hsa-let-7a-5p83.7516NM_020474
GALNT1hsa-let-7e-5p83.7516NM_020474
GALNT1hsa-let-7b-5p83.7516NM_020474
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Motifs and transcription factors (TFs) regulating GALNT1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
GALNT1transfac_pro__M04826EP300 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."