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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor

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Acts as a drug target< (This gene does not contain this module)

Gene: GABPB1

Summary for GABPB1

Gene informationGene symbol

GABPB1

Ensembl ID

ENSG00000104064

Entrez ID

2553

Gene nameGA binding protein transcription factor subunit beta 1
SynonymsE4TF1-47|GABPB|GABPB2
Gene typeprotein_coding
UniProtAcc

Q06547


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Dataset with differentially expressed gene: GABPB1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE111014

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaChronic lymphocytic leukemia (CLL)Targeted therapyibrutinibpreMalignant cells-0.2657410.00e+00

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-0.3679140.00e+00

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Expression of GABPB1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to GABPB1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating GABPB1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
GABPB1hsa-miR-432899.3822NM_005254
GABPB1hsa-miR-582-5p99.1992NM_005254
GABPB1hsa-miR-471898.5526NM_005254
GABPB1hsa-miR-551b-5p98.1715NM_005254
GABPB1hsa-miR-3613-3p97.5825NM_005254
GABPB1hsa-let-7c-3p96.4939NM_005254
GABPB1hsa-miR-6783-3p96.4928NM_005254
GABPB1hsa-miR-144-3p96.3707NM_005254
GABPB1hsa-miR-1343-3p94.9725NM_005254
GABPB1hsa-miR-451b94.5389NM_005254
GABPB1hsa-miR-513b-5p93.9074NM_005254
GABPB1hsa-miR-7-1-3p93.068NM_005254
GABPB1hsa-miR-7-2-3p93.068NM_005254
GABPB1hsa-miR-316392.9089NM_005254
GABPB1hsa-miR-6878-5p92.6162NM_005254
GABPB1hsa-miR-302f92.1931NM_005254
GABPB1hsa-miR-539-5p91.5144NM_005254
GABPB1hsa-miR-425191.4134NM_005254
GABPB1hsa-miR-3121-3p91.143NM_005254
GABPB1hsa-miR-3160-5p90.9802NM_005254
GABPB1hsa-miR-101-3p90.9514NM_005254
GABPB1hsa-miR-141-3p90.366NM_005254
GABPB1hsa-miR-6835-3p89.8699NM_005254
GABPB1hsa-miR-6515-3p89.5642NM_005254
GABPB1hsa-miR-6852-5p89.2182NM_005254
GABPB1hsa-miR-942-5p88.7939NM_005254
GABPB1hsa-let-7f-2-3p88.2558NM_005254
GABPB1hsa-miR-1185-1-3p88.2558NM_005254
GABPB1hsa-miR-1185-2-3p88.2558NM_005254
GABPB1hsa-miR-548aj-3p88.0357NM_005254
GABPB1hsa-miR-548x-3p88.0357NM_005254
GABPB1hsa-miR-200a-3p87.4356NM_005254
GABPB1hsa-miR-94487.4191NM_005254
GABPB1hsa-miR-55987.3345NM_005254
GABPB1hsa-miR-548j-3p87.1756NM_005254
GABPB1hsa-miR-548aq-3p87.1756NM_005254
GABPB1hsa-miR-548am-3p87.1756NM_005254
GABPB1hsa-miR-548ae-3p87.1756NM_005254
GABPB1hsa-miR-548ah-3p87.1756NM_005254
GABPB1hsa-miR-7112-3p86.6589NM_005254
GABPB1hsa-miR-548ar-3p86.0128NM_005254
GABPB1hsa-miR-442284.6796NM_005254
GABPB1hsa-miR-134-3p84.6624NM_005254
GABPB1hsa-miR-317584.6603NM_005254
GABPB1hsa-miR-4797-5p84.6386NM_005254
GABPB1hsa-miR-1226-5p84.542NM_002041
GABPB1hsa-miR-20a-5p84.0419NM_005254
GABPB1hsa-miR-106b-5p84.0419NM_005254
GABPB1hsa-miR-548e-3p83.5998NM_005254
GABPB1hsa-miR-548a-3p83.5998NM_005254
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Motifs and transcription factors (TFs) regulating GABPB1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
GABPB1metacluster_141.6MZF1; TAF1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZNF597 (directAnnotation). TAF1; TAF1L (inferredBy_Orthology).
GABPB1hdpi__TP73TP73 (directAnnotation).
GABPB1transfac_pro__M06259ZNF91 (directAnnotation).
GABPB1metacluster_141.2E2F2; E2F3 (directAnnotation).
GABPB1transfac_pro__M05617ZNF500 (directAnnotation).
GABPB1hdpi__HTATIP2HTATIP2 (directAnnotation).
GABPB1jaspar__MA1460.1YY1 (inferredBy_Orthology).
GABPB1hdpi__NRLNRL (directAnnotation).
GABPB1transfac_pro__M04916TAF1 (directAnnotation).
GABPB1taipale_tf_pairs__E2F1_NHLH1_SGCGCCNNNNNNNNNNNNCAGCTGNN_CAP_reprE2F1; NHLH1 (directAnnotation).
GABPB1transfac_pro__M01269NR4A2 (directAnnotation).
GABPB1transfac_pro__M01199TRIM28 (directAnnotation).
GABPB1taipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
GABPB1metacluster_166.2ELK4; ETS1; ETS1; ETV1; ETV3; ETV4; ETV5; ETV7 (directAnnotation). GABPA (inferredBy_Orthology).
GABPB1taipale_tf_pairs__ETV5_FOXI1_RSCGGATGTTGN_CAPETV5; FOXI1 (directAnnotation).
GABPB1metacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
GABPB1jaspar__MA1483.2ELF2 (directAnnotation).
GABPB1metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
GABPB1metacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
GABPB1swissregulon__hs__ETV6ETV6 (directAnnotation).
GABPB1taipale_tf_pairs__ETV2_FOXO6_RCCGGATGTTKWN_CAPETV2; FOXO6 (directAnnotation).
GABPB1taipale_tf_pairs__ELK1_FOXI1_RSCGGATGTKKN_CAPELK1; FOXI1 (directAnnotation).
GABPB1taipale_tf_pairs__ETV5_HOXA2_RSCGGWAATKR_CAPETV5; HOXA2 (directAnnotation).
GABPB1swissregulon__hs__ELF2ELF2 (directAnnotation).
GABPB1taipale_tf_pairs__FOXO1_ELK3_RCCGGAWGTKKW_CAPELK3; FOXO1 (directAnnotation).
GABPB1taipale_tf_pairs__ETV2_FOXI1_RSCGGATGTTKW_CAPETV2; FOXI1 (directAnnotation).
GABPB1taipale_tf_pairs__HOXB2_ETV4_ACCGGAAATGAN_CAPETV4; HOXB2 (directAnnotation).
GABPB1taipale_tf_pairs__FOXO1_ETV4_RCCGGAWGTKKN_CAPETV4; FOXO1 (directAnnotation).
GABPB1taipale_tf_pairs__ELK1_EOMES_TNRCACCGGAAGN_CAPELK1; EOMES (directAnnotation).
GABPB1hdpi__ETV4ETV4 (directAnnotation).
GABPB1taipale_tf_pairs__ELK1_TBX21_TNRCACCGGAAGNN_CAP_reprELK1; TBX21 (directAnnotation).
GABPB1taipale_tf_pairs__ETV5_EVX1_RSCGGWAATKR_CAPETV5; EVX1 (directAnnotation).
GABPB1metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
GABPB1taipale_tf_pairs__ERF_TBX21_TMACACCGGAAG_CAPERF; TBX21 (directAnnotation).
GABPB1kznf__ZNF441_Imbeault2017_OM_RCADEZNF441 (directAnnotation).
GABPB1cisbp__M02645ETS1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.
TFmotifExpressionCell typeDatasetTimepoint
GABPB1metacluster_166.4downMalignant cells

GSE164897_VemCob

NA
GABPB1metacluster_166.4downMalignant cells

GSE164897_VemCob

NA
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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."