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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: FYCO1

Summary for FYCO1

Gene informationGene symbol

FYCO1

Ensembl ID

ENSG00000163820

Entrez ID

79443

Gene nameFYVE and coiled-coil domain autophagy adaptor 1
SynonymsFLJ13335|ZFYVE7
Gene typeprotein_coding
UniProtAcc

Q9BQS8


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Dataset with differentially expressed gene: FYCO1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.2527941.83e-35

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Expression of FYCO1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to FYCO1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating FYCO1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
FYCO1hsa-miR-20a-5p99.7302NM_024513
FYCO1hsa-miR-106b-5p99.7302NM_024513
FYCO1hsa-miR-519d-3p99.7258NM_024513
FYCO1hsa-miR-93-5p99.7258NM_024513
FYCO1hsa-miR-17-5p99.7258NM_024513
FYCO1hsa-miR-20b-5p99.7258NM_024513
FYCO1hsa-miR-526b-3p99.7113NM_024513
FYCO1hsa-miR-106a-5p99.7113NM_024513
FYCO1hsa-miR-3085-3p97.2307NM_024513
FYCO1hsa-miR-6504-5p97.2307NM_024513
FYCO1hsa-miR-3064-5p97.2307NM_024513
FYCO1hsa-miR-544b96.7838NM_024513
FYCO1hsa-miR-655-5p96.3209NM_024513
FYCO1hsa-miR-9-5p95.5007NM_024513
FYCO1hsa-miR-6728-3p92.6516NM_024513
FYCO1hsa-miR-429792.6322NM_024513
FYCO1hsa-miR-715092.5084NM_024513
FYCO1hsa-miR-302e92.0497NM_024513
FYCO1hsa-miR-5571-5p91.9979NM_024513
FYCO1hsa-miR-182-3p91.8243NM_024513
FYCO1hsa-miR-392091.4027NM_024513
FYCO1hsa-miR-520d-3p90.9389NM_024513
FYCO1hsa-miR-4753-5p90.9334NM_024513
FYCO1hsa-miR-4725-3p90.7341NM_024513
FYCO1hsa-miR-520f-3p90.4842NM_024513
FYCO1hsa-miR-5581-5p90.0772NM_024513
FYCO1hsa-miR-597-3p89.9139NM_024513
FYCO1hsa-miR-1271-5p89.88NM_024513
FYCO1hsa-miR-1213389.88NM_024513
FYCO1hsa-miR-96-5p89.3167NM_024513
FYCO1hsa-miR-182-5p89.3167NM_024513
FYCO1hsa-miR-6780b-5p89.2753NM_024513
FYCO1hsa-miR-373-3p88.1558NM_024513
FYCO1hsa-miR-520b-3p88.128NM_024513
FYCO1hsa-miR-302d-3p88.128NM_024513
FYCO1hsa-miR-302c-3p88.128NM_024513
FYCO1hsa-miR-520e-3p88.128NM_024513
FYCO1hsa-miR-520a-3p88.128NM_024513
FYCO1hsa-miR-372-3p88.128NM_024513
FYCO1hsa-miR-302a-3p88.128NM_024513
FYCO1hsa-miR-302b-3p88.128NM_024513
FYCO1hsa-miR-520c-3p88.128NM_024513
FYCO1hsa-miR-4640-5p88.003NM_024513
FYCO1hsa-miR-874-5p87.9507NM_024513
FYCO1hsa-miR-4726-5p87.9358NM_024513
FYCO1hsa-miR-4796-3p87.0412NM_024513
FYCO1hsa-miR-428286.8611NM_024513
FYCO1hsa-miR-152-5p86.4915NM_024513
FYCO1hsa-miR-427186.454NM_024513
FYCO1hsa-miR-4717-5p85.4938NM_024513
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Motifs and transcription factors (TFs) regulating FYCO1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
FYCO1metacluster_7.13ZFX (directAnnotation).
FYCO1transfac_pro__M05479ZNF580 (directAnnotation).
FYCO1hdpi__ETV4ETV4 (directAnnotation).
FYCO1transfac_pro__M05628ZNF735 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."