DRMref Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Datasets with differential expression of this gene

leaf

Expression of this gene in the resistant group across all datasets and cell types

leaf

Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

leaf

Known drug resistance mechanisms of this gene (This gene does not contain this module)

leaf

MicroRNAs (miRNAs) regulating this gene

leaf

Motifs and transcription factors (TFs) regulating this gene

leaf

Acts as a transcription factor (This gene does not contain this module)

leaf

Acts as a drug target< (This gene does not contain this module)

Gene: FOXC1

Summary for FOXC1

Gene informationGene symbol

FOXC1

Ensembl ID

ENSG00000054598

Entrez ID

2296

Gene nameforkhead box C1
SynonymsARA|FKHL7|FREAC3|IGDA|IHG1|IRID1
Gene typeprotein_coding
UniProtAcc

Q12948


Top

Dataset with differentially expressed gene: FOXC1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells0.6369930.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.4218130.00e+00

Top

Expression of FOXC1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

Top

Significant ligand-receptor pairs related to FOXC1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

Top

MicroRNAs (miRNA) regulating FOXC1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
FOXC1hsa-miR-146a-3p99.1348NM_001453
FOXC1hsa-miR-7159-5p97.7096NM_001453
FOXC1hsa-miR-204-5p97.1037NM_001453
FOXC1hsa-miR-211-5p97.1037NM_001453
FOXC1hsa-miR-6868-3p97.0926NM_001453
FOXC1hsa-miR-138-5p96.782NM_001453
FOXC1hsa-miR-4742-5p93.6691NM_001453
FOXC1hsa-miR-9-3p92.7323NM_001453
FOXC1hsa-miR-6832-3p92.3907NM_001453
FOXC1hsa-miR-3065-5p92.371NM_001453
FOXC1hsa-miR-128392.0182NM_001453
FOXC1hsa-miR-200a-5p91.9286NM_001453
FOXC1hsa-miR-200b-5p91.9286NM_001453
FOXC1hsa-miR-42191.3017NM_001453
FOXC1hsa-miR-4755-5p91.2372NM_001453
FOXC1hsa-miR-5006-3p91.2372NM_001453
FOXC1hsa-miR-149-5p90.985NM_001453
FOXC1hsa-miR-552-3p90.6463NM_001453
FOXC1hsa-miR-76090.0427NM_001453
FOXC1hsa-miR-60088.887NM_001453
FOXC1hsa-miR-593-3p88.7012NM_001453
FOXC1hsa-miR-4723-5p88.4025NM_001453
FOXC1hsa-miR-6870-5p88.4025NM_001453
FOXC1hsa-miR-569888.4025NM_001453
FOXC1hsa-miR-7111-5p88.4025NM_001453
FOXC1hsa-miR-23b-5p88.2522NM_001453
FOXC1hsa-miR-6783-3p88.1288NM_001453
FOXC1hsa-miR-6758-3p88.0824NM_001453
FOXC1hsa-miR-1343-3p86.8069NM_001453
FOXC1hsa-miR-548l85.8824NM_001453
FOXC1hsa-miR-443985.593NM_001453
FOXC1hsa-miR-3136-5p85.593NM_001453
FOXC1hsa-miR-58385.5843NM_001453
FOXC1hsa-miR-4684-3p85.1242NM_001453
FOXC1hsa-miR-4423-5p84.7584NM_001453
FOXC1hsa-miR-380-3p84.3932NM_001453
FOXC1hsa-miR-137-3p84.0652NM_001453
FOXC1hsa-miR-23a-5p83.9828NM_001453
FOXC1hsa-miR-4740-5p83.9661NM_001453
FOXC1hsa-miR-6742-3p83.6311NM_001453
FOXC1hsa-miR-92182.5371NM_001453
FOXC1hsa-miR-4680-3p82.3552NM_001453
FOXC1hsa-miR-374c-5p81.2044NM_001453
FOXC1hsa-miR-655-3p81.2044NM_001453
FOXC1hsa-miR-4446-5p80.787NM_001453
FOXC1hsa-miR-4653-5p80.4656NM_001453
FOXC1hsa-miR-392180.4656NM_001453
FOXC1hsa-miR-62380.3538NM_001453
FOXC1hsa-miR-501-5p80.2884NM_001453
FOXC1hsa-miR-6515-5p80.0605NM_001453
Page: 1 2

Top

Motifs and transcription factors (TFs) regulating FOXC1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
FOXC1metacluster_44.7NKX3-2 (directAnnotation).
FOXC1taipale_tf_pairs__MGA_DLX2_SYAATTANWGGTGYGA_CAPDLX2; MGA (directAnnotation).
FOXC1metacluster_144.8ZNF30; ZNF30 (directAnnotation).
FOXC1metacluster_144.3ZNF704; ZNF704 (directAnnotation).
FOXC1metacluster_151.2ZNF23 (directAnnotation).
FOXC1kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
FOXC1transfac_pro__M01253CNOT3 (directAnnotation).
Page: 1

Top

Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

Top

Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."