DRMref Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Datasets with differential expression of this gene

leaf

Expression of this gene in the resistant group across all datasets and cell types

leaf

Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

leaf

Known drug resistance mechanisms of this gene (This gene does not contain this module)

leaf

MicroRNAs (miRNAs) regulating this gene

leaf

Motifs and transcription factors (TFs) regulating this gene

leaf

Acts as a transcription factor (This gene does not contain this module)

leaf

Acts as a drug target< (This gene does not contain this module)

Gene: FGF13

Summary for FGF13

Gene informationGene symbol

FGF13

Ensembl ID

ENSG00000129682

Entrez ID

2258

Gene namefibroblast growth factor 13
SynonymsFGF2|FHF2|FLJ30672|LINC00889
Gene typeprotein_coding
UniProtAcc

Q92913


Top

Dataset with differentially expressed gene: FGF13

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells0.2655715.25e-03

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells0.4125885.15e-26

Top

Expression of FGF13 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

Top

Significant ligand-receptor pairs related to FGF13

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

Top

MicroRNAs (miRNA) regulating FGF13

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
FGF13hsa-miR-3529-3p99.6475NM_001139501
FGF13hsa-miR-480198.6265NM_001139498
FGF13hsa-miR-196a-1-3p97.9092NM_001139498
FGF13hsa-miR-570-3p97.6015NM_001139498
FGF13hsa-miR-4694-3p97.4645NM_001139498
FGF13hsa-miR-4731-3p97.2894NM_001139498
FGF13hsa-miR-302c-5p96.4038NM_001139498
FGF13hsa-miR-4786-3p95.802NM_001139498
FGF13hsa-miR-5004-3p95.0031NM_001139498
FGF13hsa-miR-3675-5p94.9961NM_001139498
FGF13hsa-miR-477594.5301NM_001139498
FGF13hsa-miR-449b-3p93.9706NM_001139498
FGF13hsa-miR-1288-3p93.6035NM_001139498
FGF13hsa-miR-4762-5p93.4546NM_001139501
FGF13hsa-miR-5581-3p93.2934NM_001139498
FGF13hsa-miR-190b-3p93.1456NM_001139498
FGF13hsa-miR-806893.0995NM_001139501
FGF13hsa-miR-6792-5p91.622NM_001139498
FGF13hsa-miR-340-5p90.4102NM_001139498
FGF13hsa-miR-6732-3p90.1983NM_001139498
FGF13hsa-miR-891b90.0863NM_001139498
FGF13hsa-miR-6872-3p89.9471NM_001139498
FGF13hsa-miR-3679-5p89.8975NM_001139501
FGF13hsa-miR-316989.7981NM_001139498
FGF13hsa-miR-6729-3p89.3818NM_001139501
FGF13hsa-miR-205289.2805NM_001139501
FGF13hsa-miR-211388.7506NM_001139501
FGF13hsa-miR-19b-2-5p88.4486NM_001139501
FGF13hsa-miR-19b-1-5p88.4486NM_001139501
FGF13hsa-miR-584-3p88.1859NM_001139498
FGF13hsa-miR-1185-5p87.648NM_001139501
FGF13hsa-miR-19a-5p87.1983NM_001139501
FGF13hsa-miR-345-3p87.0146NM_001139498
FGF13hsa-miR-10522-5p86.9305NM_001139498
FGF13hsa-miR-590-3p86.8507NM_001139498
FGF13hsa-miR-539-5p86.7104NM_001139498
FGF13hsa-miR-428386.6128NM_001139498
FGF13hsa-miR-471985.2131NM_001139498
FGF13hsa-miR-5699-3p85.0772NM_001139501
FGF13hsa-miR-320a-5p84.8885NM_001139498
FGF13hsa-miR-5692b84.821NM_001139501
FGF13hsa-miR-5692c84.821NM_001139501
FGF13hsa-miR-6715a-3p84.7679NM_001139498
FGF13hsa-miR-552-5p84.0738NM_001139501
FGF13hsa-miR-4799-5p83.4072NM_001139498
FGF13hsa-miR-6514-3p83.2176NM_001139501
FGF13hsa-miR-442183.0929NM_001139501
FGF13hsa-miR-450383.0372NM_001139501
FGF13hsa-miR-200a-5p81.8612NM_001139501
FGF13hsa-miR-200b-5p81.8612NM_001139501
Page: 1 2

Top

Motifs and transcription factors (TFs) regulating FGF13

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
FGF13transfac_pro__M05993ZNF711 (directAnnotation).
FGF13hocomoco__FOXP1_HUMAN.H11MO.0.AFOXP1 (directAnnotation).
FGF13metacluster_22.16BACH2 (directAnnotation).
FGF13metacluster_110.2ZNF549 (directAnnotation).
FGF13metacluster_22.34BACH2 (directAnnotation).
FGF13swissregulon__mm__Atf2ATF2 (inferredBy_Orthology).
FGF13metacluster_22.1MAFF (inferredBy_Orthology).
FGF13transfac_pro__M06117ZNF23 (directAnnotation).
FGF13metacluster_22.37BACH1 (directAnnotation).
FGF13metacluster_22.18BACH2 (inferredBy_Orthology).
FGF13swissregulon__hs__EZH2EZH2 (directAnnotation).
FGF13metacluster_187.7FEZF1; FEZF1; ZNF384; ZNF384; ZNF384 (directAnnotation). OVOL2; OVOL3; PEG3; PLAG1; PLAGL1; PLAGL2; REST; SCAND1; ZKSCAN2; ZNF131; ZNF174; ZNF18; ZNF202; ZNF274; ZNF444; ZNF446; ZNF496; ZNF518A; ZNF518B; ZNF576; ZNF641; ZNF770; ZSCAN1; ZSCAN18; ZSCAN29; ZSCAN32; ZSCAN5A; ZSCAN5B; ZSCAN5C (inferredBy_Orthology).
FGF13metacluster_150.9VSX2; VSX2 (directAnnotation).
FGF13metacluster_155.30ZNF254 (directAnnotation).
FGF13metacluster_22.23NFE2 (directAnnotation).
FGF13transfac_pro__M06404ZNF497 (directAnnotation).
FGF13transfac_pro__M06969EBF4 (inferredBy_Orthology).
FGF13transfac_pro__M01253CNOT3 (directAnnotation).
FGF13transfac_pro__M04817ZBTB33 (directAnnotation).
FGF13transfac_pro__M02896SPI1 (inferredBy_Orthology).
FGF13swissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
FGF13cisbp__M07938E2F1 (directAnnotation).
Page: 1

Top

Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

Top

Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."