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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: FAM89A

Summary for FAM89A

Gene informationGene symbol

FAM89A

Ensembl ID

ENSG00000182118

Entrez ID

375061

Gene namefamily with sequence similarity 89 member A
SynonymsC1orf153|MGC15887
Gene typeprotein_coding
UniProtAcc

Q96GI7


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Dataset with differentially expressed gene: FAM89A

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells0.8574533.81e-05

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro-0.3087014.68e-06

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.3109170.00e+00

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells0.4547820.00e+00

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Expression of FAM89A in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to FAM89A

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating FAM89A

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
FAM89Ahsa-miR-990393.4285NM_198552
FAM89Ahsa-miR-876-3p89.0642NM_198552
FAM89Ahsa-miR-548l88.2879NM_198552
FAM89Ahsa-miR-7156-5p87.4538NM_198552
FAM89Ahsa-miR-427387.4538NM_198552
FAM89Ahsa-miR-316386.0755NM_198552
FAM89Ahsa-miR-16-5p82.259NM_198552
FAM89Ahsa-miR-424-5p82.259NM_198552
FAM89Ahsa-miR-497-5p82.259NM_198552
FAM89Ahsa-miR-195-5p82.259NM_198552
FAM89Ahsa-miR-6838-5p82.259NM_198552
FAM89Ahsa-miR-15b-5p82.259NM_198552
FAM89Ahsa-miR-15a-5p82.259NM_198552
FAM89Ahsa-miR-6728-5p80.3656NM_198552
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Motifs and transcription factors (TFs) regulating FAM89A

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
FAM89Ametacluster_7.13ZFX (directAnnotation).
FAM89Ametacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
FAM89Atransfac_pro__M05479ZNF580 (directAnnotation).
FAM89Ametacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
FAM89Akznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
FAM89Ametacluster_144.3ZNF704; ZNF704 (directAnnotation).
FAM89Ahdpi__ETV4ETV4 (directAnnotation).
FAM89Ahocomoco__KLF13_HUMAN.H11MO.0.DKLF13 (directAnnotation).
FAM89Ahomer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
FAM89Ametacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
FAM89Ajaspar__MA0079.5SP1 (directAnnotation).
FAM89Ataipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
FAM89Ataipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
FAM89Akznf__ZNF777_Imbeault2017_RP_ChIP-seqZNF777 (directAnnotation).
FAM89Ametacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
FAM89Ametacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
FAM89Ametacluster_3.14WT1; WT1 (directAnnotation).
FAM89Acisbp__M07938E2F1 (directAnnotation).
FAM89Akznf__ZNF594_Schmitges2016_RCADEZNF594 (directAnnotation).
FAM89Atransfac_pro__M04617ZBTB7A (directAnnotation).
FAM89Ametacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
FAM89Ataipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
FAM89Ataipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
FAM89Atransfac_pro__M07387ZBTB7A (directAnnotation).
FAM89Atransfac_pro__M07436WT1 (directAnnotation).
FAM89Atransfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
FAM89Atransfac_pro__M00716ZBTB14 (directAnnotation).
FAM89Aswissregulon__hs__CHD1CHD1 (directAnnotation).
FAM89Ataipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
FAM89Atransfac_pro__M04893TAF1 (directAnnotation).
FAM89Atransfac_pro__M03876ZBTB33 (directAnnotation).
FAM89Ametacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
FAM89Ametacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
FAM89Akznf__ZNF441_Imbeault2017_RP_RCADEZNF441 (directAnnotation).
FAM89Atransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
FAM89Ametacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
FAM89Atransfac_pro__M05908ZNF319 (inferredBy_Orthology).
FAM89Ataipale_tf_pairs__GCM1_ETV4_RTGCGGGCGGAAGTR_CAPETV4; GCM1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."