DRMref Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Datasets with differential expression of this gene

leaf

Expression of this gene in the resistant group across all datasets and cell types

leaf

Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

leaf

Known drug resistance mechanisms of this gene (This gene does not contain this module)

leaf

MicroRNAs (miRNAs) regulating this gene

leaf

Motifs and transcription factors (TFs) regulating this gene

leaf

Acts as a transcription factor (This gene does not contain this module)

leaf

Acts as a drug target< (This gene does not contain this module)

Gene: FAM53C

Summary for FAM53C

Gene informationGene symbol

FAM53C

Ensembl ID

ENSG00000120709

Entrez ID

51307

Gene namefamily with sequence similarity 53 member C
SynonymsC5orf6
Gene typeprotein_coding
UniProtAcc

Q9NYF3


Top

Dataset with differentially expressed gene: FAM53C

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.5002270.00e+00

Top

Expression of FAM53C in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

Top

Significant ligand-receptor pairs related to FAM53C

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

Top

MicroRNAs (miRNA) regulating FAM53C

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
FAM53Chsa-miR-124698.5425NM_001135647
FAM53Chsa-miR-6734-3p96.8075NM_001135647
FAM53Chsa-miR-797695.5832NM_001135647
FAM53Chsa-miR-3121-5p94.3373NM_001135647
FAM53Chsa-miR-426793.5775NM_001135647
FAM53Chsa-miR-6852-5p93.1999NM_001135647
FAM53Chsa-miR-3667-3p92.5042NM_001135647
FAM53Chsa-miR-185-3p91.8946NM_001135647
FAM53Chsa-miR-4436b-5p91.5354NM_001135647
FAM53Chsa-miR-6825-5p91.1231NM_001135647
FAM53Chsa-miR-5582-3p90.5295NM_001135647
FAM53Chsa-miR-848588.5912NM_001135647
FAM53Chsa-miR-6866-5p88.4066NM_001135647
FAM53Chsa-miR-4731-5p88.4063NM_001135647
FAM53Chsa-miR-182787.4812NM_001135647
FAM53Chsa-miR-6799-3p87.2486NM_001135647
FAM53Chsa-miR-3173-5p87.2486NM_001135647
FAM53Chsa-miR-448987.0151NM_001135647
FAM53Chsa-miR-499b-5p86.5015NM_001135647
FAM53Chsa-miR-1226-3p86.4428NM_001135647
FAM53Chsa-miR-428386.0125NM_001135647
FAM53Chsa-miR-607185.5022NM_001135647
FAM53Chsa-miR-299-5p85.479NM_001135647
FAM53Chsa-miR-3135b84.8719NM_001135647
FAM53Chsa-miR-4691-3p84.6899NM_001135647
FAM53Chsa-miR-450a-1-3p84.3729NM_001135647
FAM53Chsa-miR-874-3p84.1018NM_001135647
FAM53Chsa-miR-10527-5p84.0895NM_001135647
FAM53Chsa-miR-3692-3p82.8629NM_001135647
FAM53Chsa-miR-467281.9169NM_001135647
FAM53Chsa-miR-4668-5p81.2812NM_001135647
FAM53Chsa-miR-892a81.1341NM_001135647
FAM53Chsa-miR-939-3p81.1074NM_001135647
FAM53Chsa-miR-129080.2817NM_001135647
Page: 1

Top

Motifs and transcription factors (TFs) regulating FAM53C

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
FAM53Cmetacluster_144.8ZNF30; ZNF30 (directAnnotation).
FAM53Ctfdimers__MD00154MZF1; SREBF1 (directAnnotation).
FAM53Ctaipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
Page: 1

Top

Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

Top

Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."