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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: FAM43A

Summary for FAM43A

Gene informationGene symbol

FAM43A

Ensembl ID

ENSG00000185112

Entrez ID

131583

Gene namefamily with sequence similarity 43 member A
SynonymsFLJ90022
Gene typeprotein_coding
UniProtAcc

Q8N2R8


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Dataset with differentially expressed gene: FAM43A

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells-0.290056.37e-42

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells0.3144681.43e-16

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells0.3464781.03e-19

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells0.276071.12e-36

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Expression of FAM43A in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to FAM43A

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating FAM43A

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
FAM43Ahsa-miR-548f-5p98.3792NM_153690
FAM43Ahsa-miR-548x-5p98.3792NM_153690
FAM43Ahsa-miR-548aj-5p98.3792NM_153690
FAM43Ahsa-miR-548g-5p98.3792NM_153690
FAM43Ahsa-miR-19a-3p97.1427NM_153690
FAM43Ahsa-miR-19b-3p97.1427NM_153690
FAM43Ahsa-miR-545-3p95.7828NM_153690
FAM43Ahsa-miR-30d-5p95.6893NM_153690
FAM43Ahsa-miR-30a-5p95.6893NM_153690
FAM43Ahsa-miR-30c-5p94.3875NM_153690
FAM43Ahsa-miR-30e-5p94.3875NM_153690
FAM43Ahsa-miR-30b-5p94.3875NM_153690
FAM43Ahsa-miR-148b-3p92.9589NM_153690
FAM43Ahsa-miR-148a-3p92.9589NM_153690
FAM43Ahsa-miR-152-3p92.9589NM_153690
FAM43Ahsa-miR-2681-3p89.3866NM_153690
FAM43Ahsa-miR-50789.0096NM_153690
FAM43Ahsa-miR-7162-3p88.9465NM_153690
FAM43Ahsa-miR-182-5p86.9969NM_153690
FAM43Ahsa-miR-55785.8143NM_153690
FAM43Ahsa-miR-3120-3p84.1781NM_153690
FAM43Ahsa-miR-4789-5p83.9524NM_153690
FAM43Ahsa-miR-96-5p83.3293NM_153690
FAM43Ahsa-miR-3059-5p82.697NM_153690
FAM43Ahsa-let-7a-2-3p81.8958NM_153690
FAM43Ahsa-let-7g-3p81.8958NM_153690
FAM43Ahsa-miR-548aw81.8155NM_153690
FAM43Ahsa-miR-1213380.8788NM_153690
FAM43Ahsa-miR-1271-5p80.8788NM_153690
FAM43Ahsa-miR-6867-5p80.516NM_153690
FAM43Ahsa-miR-805580.3601NM_153690
FAM43Ahsa-miR-1212980.3242NM_153690
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Motifs and transcription factors (TFs) regulating FAM43A

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
FAM43Ataipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
FAM43Akznf__ZNF777_Imbeault2017_RP_ChIP-seqZNF777 (directAnnotation).
FAM43Ametacluster_187.7FEZF1; FEZF1; ZNF384; ZNF384; ZNF384 (directAnnotation). OVOL2; OVOL3; PEG3; PLAG1; PLAGL1; PLAGL2; REST; SCAND1; ZKSCAN2; ZNF131; ZNF174; ZNF18; ZNF202; ZNF274; ZNF444; ZNF446; ZNF496; ZNF518A; ZNF518B; ZNF576; ZNF641; ZNF770; ZSCAN1; ZSCAN18; ZSCAN29; ZSCAN32; ZSCAN5A; ZSCAN5B; ZSCAN5C (inferredBy_Orthology).
FAM43Ametacluster_22.37BACH1 (directAnnotation).
Page: 1

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."