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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: FAM229B

Summary for FAM229B

Gene informationGene symbol

FAM229B

Ensembl ID

ENSG00000203778

Entrez ID

619208

Gene namefamily with sequence similarity 229 member B
SynonymsC6orf225|DKFZp586F0922|LOC619208
Gene typeprotein_coding
UniProtAcc

Q4G0N7


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Dataset with differentially expressed gene: FAM229B

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells0.9948951.34e-04

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.5258970.00e+00

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells0.4200710.00e+00

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells0.4418511.89e-25

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells0.3121590.00e+00

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Expression of FAM229B in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to FAM229B

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating FAM229B

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
FAM229Bhsa-miR-10397-5p89.0573NM_001033564
FAM229Bhsa-miR-6841-5p85.815NM_001033564
FAM229Bhsa-miR-5196-3p84.8958NM_001033564
FAM229Bhsa-miR-629-3p84.266NM_001033564
FAM229Bhsa-miR-30a-5p82.6031NM_001033564
FAM229Bhsa-miR-30e-5p82.6031NM_001033564
FAM229Bhsa-miR-30d-5p82.6031NM_001033564
FAM229Bhsa-miR-30c-5p82.6031NM_001033564
FAM229Bhsa-miR-30b-5p82.6031NM_001033564
FAM229Bhsa-miR-4778-5p80.3321NM_001033564
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Motifs and transcription factors (TFs) regulating FAM229B

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
FAM229Bjaspar__MA1933.1SREBF2 (directAnnotation).
FAM229Bhdpi__ETV4ETV4 (directAnnotation).
FAM229Btaipale_tf_pairs__ELK1_TEF_NSCGGAWNTTACGTAAN_CAPELK1; TEF (directAnnotation).
FAM229Btaipale_tf_pairs__FOXO1_ELK1_TGTTGCCGGANNN_CAPELK1; FOXO1 (directAnnotation).
FAM229Bjaspar__MA1483.2ELF2 (directAnnotation).
FAM229Btaipale_tf_pairs__ELF2_NATGCGGAAGTR_HTELF2 (directAnnotation).
FAM229Bcisbp__M08198ELF1 (directAnnotation).
FAM229Bmetacluster_19.7GMEB1; GMEB2 (inferredBy_Orthology).
FAM229Btransfac_pro__M04826EP300 (directAnnotation).
FAM229Btransfac_pro__M05981ZNF233 (directAnnotation).
FAM229Bdbtfbs__E4F1_K562_ENCSR731LHZ_merged_N1E4F1 (directAnnotation).
Page: 1

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."