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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: F13A1

Summary for F13A1

Gene informationGene symbol

F13A1

Ensembl ID

ENSG00000124491

Entrez ID

2162

Gene namecoagulation factor XIII A chain
SynonymsF13A
Gene typeprotein_coding
UniProtAcc

P00488


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Dataset with differentially expressed gene: F13A1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostcDCs0.2909337.25e-04

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelprecDCs0.2971861.01e-06

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreMono/Macro0.8880320.00e+00

GSE197268_Axi-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyaxi-cel (CAR-T)postMono/Macro-0.3440730.00e+00

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro-0.3607076.84e-18

GSE162117

patientsPeripheral blood mononuclear cellsAcute myeloid leukemiaTefractory acute myeloid leukemia (AML)Targeted therapyficlatuzumabpreMalignant cells0.2766850.00e+00

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Expression of F13A1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to F13A1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating F13A1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
F13A1hsa-miR-105-5p98.124NM_000129
F13A1hsa-miR-7853-5p98.124NM_000129
F13A1hsa-miR-6865-3p93.7452NM_000129
F13A1hsa-miR-76491.8974NM_000129
F13A1hsa-miR-317191.8416NM_000129
F13A1hsa-miR-3682-3p91.6268NM_000129
F13A1hsa-miR-556-5p90.3362NM_000129
F13A1hsa-miR-366590.0376NM_000129
F13A1hsa-miR-425688.8151NM_000129
F13A1hsa-miR-11181-5p88.8151NM_000129
F13A1hsa-miR-182-5p88.4094NM_000129
F13A1hsa-miR-469888.2579NM_000129
F13A1hsa-miR-715086.4756NM_000129
F13A1hsa-miR-9983-3p86.1063NM_000129
F13A1hsa-miR-5681a85.8325NM_000129
F13A1hsa-miR-335-5p84.9515NM_000129
F13A1hsa-miR-129-5p81.3707NM_000129
F13A1hsa-miR-548p81.3588NM_000129
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Motifs and transcription factors (TFs) regulating F13A1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
F13A1metacluster_22.37BACH1 (directAnnotation).
F13A1metacluster_22.34BACH2 (directAnnotation).
F13A1kznf__ZNF384_Schmitges2016_RCADEZNF384 (directAnnotation).
F13A1metacluster_137.2ATF3; BACH2; BATF; BATF; BATF; BATF; BATF3; FOS; FOS; FOS; FOS; FOS; FOS; FOS; FOS; FOS; FOS; FOSB; FOSB; FOSB; FOSB; FOSB; FOSL1; FOSL1; FOSL1; FOSL1; FOSL1; FOSL2; FOSL2; FOSL2; FOSL2; FOSL2; FOSL2; FOSL2; INSM2; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUNB; JUNB; JUNB; JUNB; JUNB; JUND; JUND; JUND; JUND; JUND; SMARCC1 (directAnnotation). ATF3; ATF3; BATF; FOS; FOSB; FOSL1; FOSL1; FOSL2; FOSL2; FOSL2; JUN; JUN; JUN; JUN; JUN; JUN; JUN; JUNB; JUND; JUND; JUND; JUND (inferredBy_Orthology).
F13A1tfdimers__MD00276IRF1; STAT6 (directAnnotation).
F13A1tfdimers__MD00007E2F1; IRF8 (directAnnotation).
F13A1metacluster_2.9IRF2; IRF2; IRF2; PRDM1; PRDM1 (directAnnotation). PRDM1 (inferredBy_Orthology).
F13A1metacluster_2.7IRF1; IRF1; IRF2; IRF2; IRF3; IRF4; IRF5; IRF6; IRF7; IRF7; IRF8; IRF8; IRF9; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; STAT1; STAT1; STAT2 (directAnnotation). PRDM1; PRDM1; PRDM1 (inferredBy_Orthology).
F13A1tfdimers__MD00183CRX; YY1 (directAnnotation).
F13A1tfdimers__MD00394CDX2; PAX4 (directAnnotation).
F13A1kznf__ZNF33B_Imbeault2017_RP_RCADEZNF33B (directAnnotation).
F13A1transfac_pro__M06763ZNF225 (directAnnotation).
F13A1hocomoco__TYY2_HUMAN.H11MO.0.DYY2 (directAnnotation).
F13A1taipale_tf_pairs__TEAD4_CEBPD_RGWATGYNNTTRCGYAAN_CAPCEBPD; TEAD4 (directAnnotation).
F13A1cisbp__M02645ETS1 (directAnnotation).
F13A1metacluster_141.2E2F2; E2F3 (directAnnotation).
F13A1transfac_pro__M05515ZNF280B (directAnnotation).
F13A1tfdimers__MD00049MYB; OTX1; OTX2 (directAnnotation).
F13A1taipale_tf_pairs__ETV2_SOX15_RSCGGAANNNNNNNYWTTGT_CAP_reprETV2; SOX15 (directAnnotation).
F13A1transfac_pro__M06863ZNF789 (directAnnotation).
F13A1taipale_tf_pairs__PITX1_TBX21_AGGTGNGAARGGATTA_CAP_reprPITX1; TBX21 (directAnnotation).
F13A1transfac_pro__M06302ZNF506 (directAnnotation).
F13A1transfac_pro__M05542SNAPC4 (directAnnotation).
F13A1tfdimers__MD00223SOX9; TEAD1 (directAnnotation).
F13A1transfac_pro__M06732ZNF304 (directAnnotation).
F13A1transfac_pro__M05701ZNF30 (directAnnotation).
F13A1transfac_pro__M06048ZNF208 (directAnnotation).
F13A1jaspar__MA0035.4GATA1 (directAnnotation).
F13A1metacluster_31.3ZSCAN20; ZSCAN29 (directAnnotation).
F13A1transfac_pro__M05842ZBTB41 (inferredBy_Orthology).
F13A1metacluster_131.2ZNF257 (directAnnotation).
F13A1taipale_tf_pairs__HOXB2_ETV1_ACCGGAAATGA_CAPETV1; HOXB2 (directAnnotation).
F13A1metacluster_141.4GLIS2 (directAnnotation).
F13A1tfdimers__MD00217LTF; MZF1 (directAnnotation).
F13A1hdpi__GTF3C2GTF3C2 (directAnnotation).
F13A1metacluster_126.7CTCF; ZFY; ZSCAN30 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
F13A1"Anti-inhibitor coagulant complex"

DB13151

biotech
F13A1"Human thrombin"

DB11571

biotech
F13A1"N-Acetyl-Serine"

DB02340

small molecule
F13A1"Prothrombin"

DB11311

biotech
F13A1"Thrombin"

DB11300

biotech
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."