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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: ERCC4

Summary for ERCC4

Gene informationGene symbol

ERCC4

Ensembl ID

ENSG00000175595

Entrez ID

2072

Gene nameERCC excision repair 4, endonuclease catalytic subunit
SynonymsFANCQ|RAD1|XPF
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: ERCC4

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells0.5263415.78e-04

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Expression of ERCC4 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to ERCC4

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

ERCC4

Unusual Activation of Pro-survival Pathway
Page: 1

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MicroRNAs (miRNA) regulating ERCC4

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
ERCC4hsa-miR-5000-5p93.9573NM_005236
ERCC4hsa-miR-1277-5p93.6631NM_005236
ERCC4hsa-miR-494-3p93.643NM_005236
ERCC4hsa-miR-302e92.972NM_005236
ERCC4hsa-miR-4760-3p91.9397NM_005236
ERCC4hsa-miR-5692a91.734NM_005236
ERCC4hsa-miR-453091.349NM_005236
ERCC4hsa-miR-590-3p90.9025NM_005236
ERCC4hsa-miR-449390.4053NM_005236
ERCC4hsa-miR-551b-5p90.2962NM_005236
ERCC4hsa-miR-1178-5p89.9787NM_005236
ERCC4hsa-miR-313389.491NM_005236
ERCC4hsa-miR-4724-5p88.6826NM_005236
ERCC4hsa-miR-548c-3p88.6029NM_005236
ERCC4hsa-miR-368588.4961NM_005236
ERCC4hsa-miR-1252-3p88.2371NM_005236
ERCC4hsa-miR-454-3p87.9483NM_005236
ERCC4hsa-miR-519c-3p87.8957NM_005236
ERCC4hsa-miR-519b-3p87.8957NM_005236
ERCC4hsa-miR-519a-3p87.8957NM_005236
ERCC4hsa-miR-301b-3p87.7289NM_005236
ERCC4hsa-miR-301a-3p87.7289NM_005236
ERCC4hsa-miR-130a-3p87.7289NM_005236
ERCC4hsa-miR-130b-3p87.7289NM_005236
ERCC4hsa-miR-366687.7289NM_005236
ERCC4hsa-miR-429587.7289NM_005236
ERCC4hsa-miR-450086.576NM_005236
ERCC4hsa-miR-445885.9515NM_005236
ERCC4hsa-let-7d-5p85.9515NM_005236
ERCC4hsa-miR-520g-5p85.333NM_005236
ERCC4hsa-miR-3613-3p85.0131NM_005236
ERCC4hsa-miR-302a-3p84.5961NM_005236
ERCC4hsa-miR-302c-3p84.5961NM_005236
ERCC4hsa-miR-302d-3p84.5961NM_005236
ERCC4hsa-miR-302b-3p84.5961NM_005236
ERCC4hsa-miR-4536-5p83.819NM_005236
ERCC4hsa-let-7i-5p83.8131NM_005236
ERCC4hsa-let-7e-5p83.8131NM_005236
ERCC4hsa-let-7c-5p83.8131NM_005236
ERCC4hsa-let-7g-5p83.8131NM_005236
ERCC4hsa-let-7b-5p83.8131NM_005236
ERCC4hsa-let-7a-5p83.8131NM_005236
ERCC4hsa-miR-98-5p83.8131NM_005236
ERCC4hsa-let-7f-5p83.8131NM_005236
ERCC4hsa-miR-364683.6729NM_005236
ERCC4hsa-miR-133a-5p83.6307NM_005236
ERCC4hsa-miR-6885-3p83.1943NM_005236
ERCC4hsa-miR-95-5p82.523NM_005236
ERCC4hsa-miR-520e-3p82.4632NM_005236
ERCC4hsa-miR-520c-3p82.4632NM_005236
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Motifs and transcription factors (TFs) regulating ERCC4

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
ERCC4kznf__ZNF594_Schmitges2016_RCADEZNF594 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."