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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: EPCAM

Summary for EPCAM

Gene informationGene symbol

EPCAM

Ensembl ID

ENSG00000119888

Entrez ID

4072

Gene nameepithelial cell adhesion molecule
Synonyms17-1A|323/A3|Ber-Ep4|BerEp4|CD326|CO-17A|EGP-2|EGP34|EGP40|Ep-CAM|ESA|GA733-2|HEA125|KS1/4|KSA|Ly74|M4S1|MH99|MIC18|MK-1|MOC-31|MOC31|TACST-1|TACSTD1|TROP1
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: EPCAM

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells-0.3448770.00e+00

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells0.5487711.67e-20

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreErythrocytes-0.3711671.11e-17

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.8144020.00e+00

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells0.4667530.00e+00

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Expression of EPCAM in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to EPCAM

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating EPCAM

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
EPCAMhsa-miR-430795.46NM_002354
EPCAMhsa-miR-33a-3p92.105NM_002354
EPCAMhsa-miR-520d-5p90.3775NM_002354
EPCAMhsa-miR-524-5p90.3775NM_002354
EPCAMhsa-miR-431889.9921NM_002354
EPCAMhsa-miR-1213688.0266NM_002354
EPCAMhsa-miR-46687.3287NM_002354
EPCAMhsa-miR-4789-3p86.4746NM_002354
EPCAMhsa-miR-432883.7811NM_002354
EPCAMhsa-miR-6839-5p83.7244NM_002354
EPCAMhsa-miR-5692a82.5155NM_002354
EPCAMhsa-miR-129082.3019NM_002354
EPCAMhsa-miR-590-3p82.2629NM_002354
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Motifs and transcription factors (TFs) regulating EPCAM

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
EPCAMtransfac_pro__M06035ZNF749 (directAnnotation).
EPCAMkznf__ZNF282_Imbeault2017_OM_RCADEZNF282 (directAnnotation).
EPCAMtaipale_tf_pairs__MEIS1_ELF1_NTGCCGGAAGTN_CAP_reprELF1; MEIS1 (directAnnotation).
EPCAMtaipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
EPCAMtransfac_pro__M06135ZNF28 (directAnnotation).
EPCAMhocomoco__TYY2_HUMAN.H11MO.0.DYY2 (directAnnotation).
EPCAMcisbp__M02645ETS1 (directAnnotation).
EPCAMmetacluster_141.4GLIS2 (directAnnotation).
EPCAMtaipale__YY2_DBD_NNCCGCCATNW_reprYY2 (directAnnotation).
EPCAMtfdimers__MD00364WT1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
EPCAM"Catumaxomab"

DB06607

biotech
EPCAM"Hypromellose"

DB11075

small molecule
EPCAM"ING-1"

DB05831

small molecule
EPCAM"Oportuzumab monatox"

DB05319

biotech
EPCAM"Technetium Tc-99m nofetumomab merpentan"

DB09336

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."