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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: EPB41L1

Summary for EPB41L1

Gene informationGene symbol

EPB41L1

Ensembl ID

ENSG00000088367

Entrez ID

2036

Gene nameerythrocyte membrane protein band 4.1 like 1
Synonyms4.1N|KIAA0338
Gene typeprotein_coding
UniProtAcc

Q9H4G0


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Dataset with differentially expressed gene: EPB41L1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells0.3245570.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells0.4130290.00e+00

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Expression of EPB41L1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to EPB41L1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating EPB41L1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
EPB41L1hsa-miR-7152-5p99.5976NM_001258330
EPB41L1hsa-miR-5011-5p99.5611NM_001258329
EPB41L1hsa-miR-3074-5p97.4269NM_001258329
EPB41L1hsa-miR-3191-3p96.8816NM_001258329
EPB41L1hsa-miR-6870-5p96.2622NM_001258330
EPB41L1hsa-miR-190a-3p95.9482NM_001258330
EPB41L1hsa-miR-3140-3p95.4121NM_001258329
EPB41L1hsa-miR-569894.6436NM_001258330
EPB41L1hsa-miR-4723-5p94.6436NM_001258330
EPB41L1hsa-miR-7111-5p94.6436NM_001258330
EPB41L1hsa-miR-428894.0971NM_001258330
EPB41L1hsa-miR-18a-5p93.5924NM_001258329
EPB41L1hsa-miR-18b-5p93.5924NM_001258329
EPB41L1hsa-miR-63293.5529NM_001258330
EPB41L1hsa-miR-6794-5p93.3326NM_001258330
EPB41L1hsa-miR-4735-3p93.1534NM_001258329
EPB41L1hsa-miR-4716-3p93.0893NM_001258330
EPB41L1hsa-miR-3121-5p92.6367NM_001258329
EPB41L1hsa-miR-6825-5p92.53NM_001258330
EPB41L1hsa-miR-430691.663NM_001258330
EPB41L1hsa-miR-612490.4471NM_001258330
EPB41L1hsa-miR-124890.2943NM_001258329
EPB41L1hsa-miR-52790.0698NM_001258329
EPB41L1hsa-miR-518a-5p90.0698NM_001258329
EPB41L1hsa-miR-6895-3p89.7006NM_001258329
EPB41L1hsa-miR-3127-3p89.1876NM_001258329
EPB41L1hsa-miR-6756-3p89.1876NM_001258329
EPB41L1hsa-miR-6764-3p88.482NM_001258329
EPB41L1hsa-miR-518c-5p88.482NM_001258329
EPB41L1hsa-miR-6824-3p88.482NM_001258329
EPB41L1hsa-miR-330-5p88.482NM_001258329
EPB41L1hsa-miR-4640-5p88.4585NM_001258330
EPB41L1hsa-miR-470588.1729NM_001258329
EPB41L1hsa-miR-5008-5p88.0249NM_001258329
EPB41L1hsa-miR-63687.827NM_001258330
EPB41L1hsa-miR-519387.6162NM_001258329
EPB41L1hsa-miR-3191-5p87.1445NM_001258329
EPB41L1hsa-miR-4726-5p86.5948NM_001258330
EPB41L1hsa-miR-3667-5p86.2367NM_001258330
EPB41L1hsa-miR-6847-3p86.1617NM_001258329
EPB41L1hsa-miR-32685.9913NM_001258329
EPB41L1hsa-miR-427685.8674NM_001258330
EPB41L1hsa-miR-30085.7882NM_001258330
EPB41L1hsa-miR-381-3p85.7882NM_001258330
EPB41L1hsa-miR-216a-3p85.4128NM_001258329
EPB41L1hsa-miR-128-3p85.4128NM_001258329
EPB41L1hsa-miR-3688-5p85.2458NM_001258330
EPB41L1hsa-miR-3675-3p84.9805NM_001258330
EPB41L1hsa-miR-891a-3p83.8351NM_001258330
EPB41L1hsa-miR-445583.8241NM_001258330
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Motifs and transcription factors (TFs) regulating EPB41L1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
EPB41L1metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
EPB41L1taipale_tf_pairs__ELK1_TEF_NSCGGAWNTTACGTAAN_CAPELK1; TEF (directAnnotation).
EPB41L1taipale_tf_pairs__ETV2_HOXA2_NCCGGAAGTMATTA_CAP_reprETV2; HOXA2 (directAnnotation).
EPB41L1taipale_tf_pairs__HOXB2_ELK3_RSCGGAAGTMRTTA_CAPELK3; HOXB2 (directAnnotation).
EPB41L1taipale_tf_pairs__HOXB2_ETV4_ACCGGAAATGAN_CAPETV4; HOXB2 (directAnnotation).
EPB41L1taipale_tf_pairs__ELK1_HOXA1_RCCGGAAGTAATTA_HTELK1; HOXA1 (directAnnotation).
EPB41L1taipale_tf_pairs__HOXB2_ELF1_SMGGAAGTMRTTA_CAPELF1; HOXB2 (directAnnotation).
EPB41L1cisbp__M08198ELF1 (directAnnotation).
EPB41L1metacluster_198.7AHR; ZBTB14; ZBTB14; ZBTB14 (directAnnotation).
EPB41L1jaspar__MA1957.1ELK1 (directAnnotation).
EPB41L1stark__RCGCMATTWYY1 (inferredBy_Orthology).
EPB41L1transfac_pro__M00652NRF1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."