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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor

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Acts as a drug target< (This gene does not contain this module)

Gene: EGR1

Summary for EGR1

Gene informationGene symbol

EGR1

Ensembl ID

ENSG00000120738

Entrez ID

1958

Gene nameearly growth response 1
Synonyms225|AT225|G0S30|KROX-24|NGFI-A|TIS8|ZIF-268
Gene typeprotein_coding
UniProtAcc

P18146


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Dataset with differentially expressed gene: EGR1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE131984_Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)ChemotherapypaclitaxelNAMalignant cells-1.240470.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostMono/Macro-0.835990.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostCD8+ T cells0.4208253.92e-07

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostNK cells0.3533611.82e-09

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostB cells0.3878772.78e-03

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.5915933.21e-16

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAPhysiology B cells-0.354389.16e-05

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreMono/Macro-0.6030780.00e+00

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostB cells0.7105411.51e-14

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostCD8+ T cells0.2940142.62e-38

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostMono/Macro0.6488674.04e-06

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreMono/Macro0.4103712.43e-03

GSE197268_Axi-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyaxi-cel (CAR-T)postcDCs-0.4992691.60e-05

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro0.7510893.83e-35

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMalignant cells-1.151781.27e-02

GSE150930

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaMucosa-assisted lymphoid tissue (MALT) lymphomaImmunotherapyrituximab + cyclophosphamide + fludarabineNAMalignant cells-0.7697760.00e+00

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postNeutrophils-0.7511732.24e-25

GSE197268_Tisa-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapytisa-cel (CAR-T)postMono/Macro0.3771210.00e+00

GSE197268_Tisa-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapytisa-cel (CAR-T)preMono/Macro0.2612921.80e-07

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells1.130830.00e+00

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postCD4+ T cells-1.439950.00e+00

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postCD8+ T cells-1.168410.00e+00

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.691150.00e+00

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepreMalignant cells-1.732170.00e+00

GSE162117

patientsPeripheral blood mononuclear cellsAcute myeloid leukemiaTefractory acute myeloid leukemia (AML)Targeted therapyficlatuzumabpreMalignant cells-0.2999360.00e+00

GSE111014

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaChronic lymphocytic leukemia (CLL)Targeted therapyibrutinibpreMono/Macro0.4275452.58e-07

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells0.2675757.44e-06

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells0.4866873.29e-15

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells0.6820512.80e-45

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepreMalignant cells1.059360.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-1.779543.07e-17

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells0.3919080.00e+00

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Expression of EGR1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to EGR1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

EGR1

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating EGR1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
EGR1hsa-miR-374c-5p97.4156NM_001964
EGR1hsa-miR-655-3p97.4156NM_001964
EGR1hsa-miR-3613-3p97.32NM_001964
EGR1hsa-miR-3121-3p96.7198NM_001964
EGR1hsa-miR-3145-5p96.1853NM_001964
EGR1hsa-miR-5692a94.3668NM_001964
EGR1hsa-miR-469294.1858NM_001964
EGR1hsa-miR-3140-5p93.2719NM_001964
EGR1hsa-miR-451492.4665NM_001964
EGR1hsa-miR-30a-3p92.2359NM_001964
EGR1hsa-miR-30d-3p92.2359NM_001964
EGR1hsa-miR-30e-3p92.2359NM_001964
EGR1hsa-miR-477590.089NM_001964
EGR1hsa-miR-4687-3p89.4614NM_001964
EGR1hsa-miR-369-3p88.4574NM_001964
EGR1hsa-miR-4704-3p86.8846NM_001964
EGR1hsa-miR-593-5p85.9083NM_001964
EGR1hsa-miR-9851-3p85.9083NM_001964
EGR1hsa-miR-5581-3p85.2291NM_001964
EGR1hsa-miR-526a-3p85.0503NM_001964
EGR1hsa-miR-518d-3p85.0503NM_001964
EGR1hsa-miR-518c-3p85.0503NM_001964
EGR1hsa-miR-518f-3p85.0503NM_001964
EGR1hsa-miR-518b85.0503NM_001964
EGR1hsa-miR-518a-3p85.0503NM_001964
EGR1hsa-miR-3064-3p83.6112NM_001964
EGR1hsa-miR-524-5p82.9698NM_001964
EGR1hsa-miR-520d-5p82.9698NM_001964
EGR1hsa-miR-3184-3p82.9639NM_001964
EGR1hsa-miR-480381.9984NM_001964
EGR1hsa-miR-548an81.9253NM_001964
EGR1hsa-miR-4742-5p81.1343NM_001964
EGR1hsa-miR-124-3p80.7735NM_001964
EGR1hsa-miR-506-3p80.7735NM_001964
EGR1hsa-miR-6748-3p80.0081NM_001964
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Motifs and transcription factors (TFs) regulating EGR1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
EGR1transfac_pro__M07604MECOM; RUNX1 (directAnnotation).
EGR1metacluster_131.3ZNF436 (inferredBy_Orthology).
EGR1cisbp__M00273CRX (directAnnotation).
EGR1tfdimers__MD00175EP300; GTF2IRD1 (directAnnotation).
EGR1transfac_pro__M02919HNF1A (inferredBy_Orthology).
EGR1transfac_pro__M12556ETV4 (directAnnotation).
EGR1jaspar__MA0604.1ATF1 (inferredBy_Orthology).
EGR1swissregulon__hs__ETV6ETV6 (directAnnotation).
EGR1taipale_tf_pairs__TEAD4_ETV4_RCCGGAAATRCC_CAPETV4; TEAD4 (directAnnotation).
EGR1taipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
EGR1jaspar__MA1708.1ETV7 (directAnnotation).
EGR1transfac_pro__M05991ZFP64 (directAnnotation).
EGR1kznf__ZNF384_Schmitges2016_RCADEZNF384 (directAnnotation).
EGR1transfac_pro__M06671ZNF285 (directAnnotation).
EGR1transfac_pro__M06715ZNF331 (directAnnotation).
EGR1metacluster_74.19HNF1A (inferredBy_Orthology).
EGR1transfac_pro__M05638ZNF736 (directAnnotation).
EGR1transfac_pro__M06648ZNF607 (directAnnotation).
EGR1transfac_pro__M05604ZNF143 (inferredBy_Orthology).
EGR1swissregulon__hs__ELF2ELF2 (directAnnotation).
EGR1transfac_pro__M05915ZBTB20 (directAnnotation).
EGR1transfac_pro__M05551KLF8 (inferredBy_Orthology).
EGR1transfac_pro__M06949EVX2 (directAnnotation).
EGR1taipale_cyt_meth__PITX2_YTAATCCN_FLPITX2 (directAnnotation).
EGR1cisbp__M00311PITX2 (directAnnotation).
EGR1tfdimers__MD00515ARID3A; KLF4 (directAnnotation).
EGR1transfac_pro__M06902ZNF611 (directAnnotation).
EGR1metacluster_132.4MEF2B; MEF2B; MEF2B; MEF2B; MEF2C; MEF2C; MEF2D; MEF2D; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF (directAnnotation). SRF; SRF; SRF; SRF (inferredBy_Orthology).
EGR1transfac_pro__M06783ZNF443 (directAnnotation).
EGR1hocomoco__FOXJ3_HUMAN.H11MO.1.BFOXJ3 (directAnnotation).
EGR1transfac_public__M00095CUX1 (directAnnotation).
EGR1tfdimers__MD00002CRX (directAnnotation).
EGR1transfac_pro__M06591ZNF681 (directAnnotation).
EGR1transfac_pro__M06067ZNF195 (directAnnotation).
EGR1metacluster_74.10HNF1B (directAnnotation).
EGR1transfac_pro__M05506ZSCAN16 (directAnnotation).
EGR1kznf__ZNF649_Imbeault2017_OM_RCADEZNF649 (directAnnotation).
EGR1transfac_pro__M06374ZNF626 (directAnnotation).
EGR1tfdimers__MD00355HOXA13; MZF1 (directAnnotation).
EGR1hocomoco__DPRX_HUMAN.H11MO.0.DDPRX (directAnnotation).
EGR1transfac_pro__M06484ZNF683 (directAnnotation).
EGR1metacluster_135.11NR2C2 (directAnnotation).
EGR1metacluster_2.6IRF1; IRF1; IRF1; IRF1; IRF1; IRF1; IRF1; IRF1; IRF1; IRF1; IRF2; IRF2; IRF2; IRF2; IRF2; IRF2; IRF2; IRF3; IRF3; IRF3; IRF3; IRF3; IRF3; IRF4; IRF4; IRF4; IRF4; IRF4; IRF5; IRF5; IRF5; IRF5; IRF5; IRF5; IRF5; IRF6; IRF7; IRF7; IRF7; IRF7; IRF7; IRF7; IRF7; IRF8; IRF8; IRF8; IRF8; IRF8; IRF8; IRF8; IRF8; IRF9; IRF9; IRF9; IRF9; IRF9; IRF9; IRF9; STAT1; STAT2; STAT2; STAT2; STAT2; ZNF426; ZNF71 (directAnnotation). IRF1; IRF1; IRF3; IRF8 (inferredBy_Orthology).
EGR1metacluster_2.7IRF1; IRF1; IRF2; IRF2; IRF3; IRF4; IRF5; IRF6; IRF7; IRF7; IRF8; IRF8; IRF9; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; STAT1; STAT1; STAT2 (directAnnotation). PRDM1; PRDM1; PRDM1 (inferredBy_Orthology).
EGR1metacluster_2.9IRF2; IRF2; IRF2; PRDM1; PRDM1 (directAnnotation). PRDM1 (inferredBy_Orthology).
EGR1metacluster_0.2CRX; CRX; CRX; CRX; CRX; CRX; CRX; CRX; DMBX1; DMBX1; DPRX; GSC; GSC; GSC; GSC; GSC; GSC; GSC2; GSC2; GSC2; OTX1; OTX1; OTX1; OTX1; OTX1; OTX1; OTX2; OTX2; OTX2; OTX2; OTX2; OTX2; OTX2; OTX2; PITX1; PITX1; PITX1; PITX1; PITX1; PITX1; PITX1; PITX1; PITX1; PITX1; PITX2; PITX2; PITX2; PITX2; PITX2; PITX2; PITX2; PITX2; PITX2; PITX2; PITX3; PITX3; PITX3; PITX3; RAX; RHOXF1; RHOXF1; RHOXF1; RHOXF2; RHOXF2 (directAnnotation). CRX; CRX; CRX; CRX; CRX; DMBX1; DMBX1; DMBX1; GSC; GSC; OTX1; OTX1; OTX2; OTX2; PITX1; PITX1; PITX1; PITX3 (inferredBy_Orthology).
EGR1tfdimers__MD00007E2F1; IRF8 (directAnnotation).
EGR1metacluster_160.15ATF5; ATF5 (directAnnotation).
EGR1tfdimers__MD00386GTF2IRD1; POU5F1 (directAnnotation).
EGR1taipale_tf_pairs__TEAD4_HOXA2_RCATTCNNNNNNCATTA_CAPHOXA2; TEAD4 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.
TFmotifExpressionCell typeDatasetTimepoint
EGR1metacluster_34.3upMalignant cells

GSE131984_JQ1

NA
EGR1metacluster_34.3downMalignant cells

GSE131984_Pac

NA
EGR1metacluster_55.3upMalignant cells

GSE131984_Pal

NA
EGR1metacluster_34.3upMalignant cells

GSE131984_Pal

NA
EGR1metacluster_55.3upMalignant cells

GSE161801_IMiD

pre
EGR1metacluster_34.3upMalignant cells

GSE161801_IMiD

pre
EGR1cisbp__M01864upMono/Macro

GSE164551

NA
EGR1metacluster_131.7upMono/Macro

GSE164551

NA
EGR1metacluster_34.3upMalignant cells

GSE164897_VemCob

NA
EGR1metacluster_55.3upB cells

GSE169246_PacAteTissue

post
EGR1metacluster_55.3downMalignant cells

GSE175716

NA
EGR1transfac_pro__M04918downMalignant cells

GSE175716

NA
EGR1transfac_pro__M04950upMalignant cells

GSE207422_Tor

post
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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."