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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: EGFR

Summary for EGFR

Gene informationGene symbol

EGFR

Ensembl ID

ENSG00000146648

Entrez ID

1956

Gene nameepidermal growth factor receptor
SynonymsERBB|ERBB1|ERRP
Gene typeprotein_coding
UniProtAcc

P00533


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Dataset with differentially expressed gene: EGFR

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells0.3135950.00e+00

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells-0.5194357.56e-23

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-1.002440.00e+00

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells-0.3551020.00e+00

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells0.3268011.31e-14

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Expression of EGFR in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to EGFR

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

EGFR

Aberration of the Drug's Therapeutic Target

EGFR

Epigenetic Alteration of DNA, RNA or Protein

EGFR

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating EGFR

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
EGFRhsa-miR-141-5p98.5365NM_005228
EGFRhsa-miR-6878-5p96.173NM_201282
EGFRhsa-miR-514a-3p95.4156NM_201284
EGFRhsa-miR-514b-3p95.4156NM_201284
EGFRhsa-miR-453395.0425NM_201284
EGFRhsa-miR-6867-5p93.2892NM_005228
EGFRhsa-miR-7157-3p91.6871NM_201284
EGFRhsa-miR-6737-3p91.6871NM_201284
EGFRhsa-miR-27b-3p90.8609NM_005228
EGFRhsa-miR-998590.8609NM_005228
EGFRhsa-miR-27a-3p90.8609NM_005228
EGFRhsa-miR-7110-3p90.6146NM_201283
EGFRhsa-miR-5008-3p90.4763NM_201284
EGFRhsa-miR-876-3p89.8924NM_201284
EGFRhsa-miR-465189.4244NM_005228
EGFRhsa-miR-60889.4244NM_005228
EGFRhsa-miR-6742-3p89.2195NM_005228
EGFRhsa-miR-548c-3p89.2136NM_005228
EGFRhsa-miR-875-5p88.6301NM_005228
EGFRhsa-miR-548ax88.088NM_005228
EGFRhsa-miR-548ao-5p88.088NM_005228
EGFRhsa-miR-548e-5p87.731NM_005228
EGFRhsa-miR-7-5p87.6955NM_005228
EGFRhsa-miR-6852-5p87.3013NM_005228
EGFRhsa-miR-939-3p87.3013NM_005228
EGFRhsa-miR-4727-3p86.8628NM_201282
EGFRhsa-miR-141-3p86.707NM_201283
EGFRhsa-miR-200a-3p86.707NM_201283
EGFRhsa-miR-6783-3p86.2204NM_005228
EGFRhsa-miR-1343-3p85.6411NM_005228
EGFRhsa-miR-133a-3p85.021NM_005228
EGFRhsa-miR-133b85.021NM_005228
EGFRhsa-miR-6760-5p84.9939NM_201282
EGFRhsa-miR-1212084.9159NM_005228
EGFRhsa-miR-129084.8314NM_005228
EGFRhsa-miR-6875-3p84.189NM_005228
EGFRhsa-miR-6828-3p84.1258NM_005228
EGFRhsa-miR-367484.0042NM_201282
EGFRhsa-miR-7110-5p81.9953NM_201284
EGFRhsa-miR-6842-5p81.9953NM_201284
EGFRhsa-miR-1252-5p80.5403NM_201284
EGFRhsa-miR-392980.3966NM_005228
EGFRhsa-miR-447880.3966NM_005228
EGFRhsa-miR-3616-5p80.3587NM_005228
EGFRhsa-miR-57380.3587NM_005228
EGFRhsa-miR-6819-5p80.2273NM_005228
EGFRhsa-miR-6737-5p80.2273NM_005228
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Motifs and transcription factors (TFs) regulating EGFR

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
EGFRmetacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
EGFRmetacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
EGFRdbtfbs__E2F8_representative_N1E2F8 (directAnnotation).
EGFRtransfac_pro__M04950EGR1 (directAnnotation).
EGFRmetacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
EGFRmetacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
EGFRtaipale_cyt_meth__E2F2_GCGCGCGCGYW_eDBD_reprE2F2 (directAnnotation).
EGFRtaipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
EGFRcisbp__M08198ELF1 (directAnnotation).
EGFRtransfac_pro__M00652NRF1 (directAnnotation).
EGFRhdpi__ETV4ETV4 (directAnnotation).
EGFRtaipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
EGFRtransfac_pro__M04866HDAC2 (directAnnotation).
EGFRjaspar__MA1122.1TFDP1 (directAnnotation).
EGFRmetacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
EGFRtransfac_pro__M07436WT1 (directAnnotation).
EGFRtransfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
EGFRtransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
EGFRtransfac_pro__M02089E2F3 (directAnnotation).
EGFRtransfac_pro__M07329SP7 (directAnnotation).
EGFRtransfac_pro__M01122ZNF219 (directAnnotation).
EGFRkznf__ZNF90_Imbeault2017_OM_RCADEZNF90 (directAnnotation).
EGFRmetacluster_44.7NKX3-2 (directAnnotation).
EGFRtaipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
EGFRtransfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
EGFRtransfac_pro__M08819KLF2 (directAnnotation).
EGFRtransfac_pro__M01175ZBTB7B (directAnnotation).
EGFRtransfac_pro__M01118WT1 (directAnnotation).
EGFRswissregulon__hs__KLF6KLF6 (directAnnotation).
EGFRtransfac_pro__M01303SP1 (directAnnotation).
EGFRtransfac_pro__M04595SALL2 (directAnnotation).
EGFRtransfac_pro__M01837KLF11 (directAnnotation).
EGFRtransfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
EGFRtransfac_pro__M00716ZBTB14 (directAnnotation).
EGFRmetacluster_133.2CPSF4; CPSF4; E2F4; FOXO3; KLF13; KLF15; KLF17; KLF5; MAZ; MAZ; MAZ; MZF1; PATZ1; PATZ1; PATZ1; PATZ1; PLAG1; PRDM9; SP4; VEZF1; WT1; ZBTB17; ZBTB7A; ZBTB7A; ZBTB7B; ZNF148; ZNF148; ZNF148; ZNF148; ZNF180; ZNF180; ZNF202; ZNF219; ZNF219; ZNF263; ZNF263; ZNF28; ZNF281; ZNF281; ZNF281; ZNF281; ZNF281; ZNF383; ZNF398; ZNF398; ZNF444; ZNF444; ZNF467; ZNF543; ZNF543; ZNF641; ZNF692; ZNF737; ZNF740; ZNF740; ZNF740; ZNF740; ZNF740; ZNF740; ZNF740; ZNF740; ZNF740; ZNF880; ZNF880 (directAnnotation). MAZ; PLAG1; PLAGL1; SP1; SP5; SP5; ZBTB17; ZNF281; ZNF281; ZNF281; ZNF641; ZNF740; ZNF740; ZNF740; ZNF740 (inferredBy_Orthology).
EGFRtransfac_pro__M07397ZNF148 (directAnnotation).
EGFRtransfac_pro__M12686ZBTB10 (directAnnotation).
EGFRtransfac_pro__M00807EGR1; EGR2; EGR3 (directAnnotation).
EGFRtransfac_pro__M01104OVOL2 (directAnnotation).
EGFRtransfac_pro__M00986CHURC1 (directAnnotation).
EGFRtransfac_pro__M07310SP5 (directAnnotation).
EGFRjaspar__MA0079.5SP1 (directAnnotation).
EGFRkznf__KLF1_Barrera2016.2_PBMKLF1 (directAnnotation).
EGFRtransfac_pro__M01253CNOT3 (directAnnotation).
EGFRhdpi__NFIXNFIX (directAnnotation).
EGFRtransfac_pro__M04817ZBTB33 (directAnnotation).
EGFRcisbp__M07938E2F1 (directAnnotation).
EGFRkznf__ZBTB14_Schmitges2016_RCADEZBTB14 (directAnnotation).
EGFRtaipale_tf_pairs__E2F3_HES7_NNNNGCGCSNNNNNCACGTGNN_CAPE2F3; HES7 (directAnnotation).
EGFRtaipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
EGFR"Abivertinib"

DB15327

small molecule
EGFR"Afatinib"

DB08916

small molecule
EGFR"Almonertinib"

DB16640

small molecule
EGFR"Alvocidib"

DB03496

small molecule
EGFR"Amivantamab"

DB16695

biotech
EGFR"AV-412"

DB06021

small molecule
EGFR"Brigatinib"

DB12267

small molecule
EGFR"Canertinib"

DB05424

small molecule
EGFR"Cetuximab"

DB00002

biotech
EGFR"Dacomitinib"

DB11963

small molecule
EGFR"Depatuxizumab mafodotin"

DB11731

biotech
EGFR"Erlotinib"

DB00530

small molecule
EGFR"Foreskin keratinocyte (neonatal)"

DB10772

biotech
EGFR"Fostamatinib"

DB12010

small molecule
EGFR"Gefitinib"

DB00317

small molecule
EGFR"Icotinib"

DB11737

small molecule
EGFR"IGN311"

DB04988

biotech
EGFR"Lapatinib"

DB01259

small molecule
EGFR"Lidocaine"

DB00281

small molecule
EGFR"Matuzumab"

DB05101

biotech
EGFR"Mobocertinib"

DB16390

small molecule
EGFR"Necitumumab"

DB09559

biotech
EGFR"Neratinib"

DB11828

small molecule
EGFR"Olmutinib"

DB13164

small molecule
EGFR"Osimertinib"

DB09330

small molecule
EGFR"Panitumumab"

DB01269

biotech
EGFR"PD-168393"

DB07662

small molecule
EGFR"Pelitinib"

DB05524

small molecule
EGFR"Poziotinib"

DB12114

small molecule
EGFR"Rindopepimut"

DB05374

small molecule
EGFR"S-{3-[(4-ANILINOQUINAZOLIN-6-YL)AMINO]-3-OXOPROPYL}-L-CYSTEINE"

DB07602

small molecule
EGFR"Vandetanib"

DB05294

small molecule
EGFR"Varlitinib"

DB05944

small molecule
EGFR"Zalutumumab"

DB12202

biotech
EGFR"Zanubrutinib"

DB15035

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."

1Phase I study of continuous afatinib (BIBW 2992) in patients with advanced non-small cell lung cancer after prior chemotherapy/erlotinib/gefitinib (LUX-Lung 4)
2The EGFR T790M mutation in acquired resistance to an irreversible second-generation EGFR inhibitor
3Acquired resistance of EGFR-mutant lung adenocarcinomas to afatinib plus cetuximab is associated with activation of mTORC1
4"Lung cancers with acquired resistance to EGFR inhibitors occasionally harbor BRAF gene mutations but lack mutations in KRAS, NRAS, or MEK1"
5Acquired resistance to EGFR inhibitors is associated with a manifestation of stem cell-like properties in cancer cells