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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: EBF3

Summary for EBF3

Gene informationGene symbol

EBF3

Ensembl ID

ENSG00000108001

Entrez ID

253738

Gene nameEBF transcription factor 3
SynonymsCOE3|DKFZp667B0210
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: EBF3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells0.2845590.00e+00

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Expression of EBF3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to EBF3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating EBF3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
EBF3hsa-miR-806098.6124NM_001005463
EBF3hsa-miR-65098.5041NM_001005463
EBF3hsa-miR-361298.5041NM_001005463
EBF3hsa-miR-7154-5p97.9325NM_001005463
EBF3hsa-miR-62196.7616NM_001005463
EBF3hsa-miR-120696.5675NM_001005463
EBF3hsa-miR-366296.315NM_001005463
EBF3hsa-miR-3688-5p96.2875NM_001005463
EBF3hsa-miR-3613-3p95.436NM_001005463
EBF3hsa-miR-447094.7669NM_001005463
EBF3hsa-miR-444394.6896NM_001005463
EBF3hsa-miR-5195-3p94.6517NM_001005463
EBF3hsa-miR-145-5p94.6517NM_001005463
EBF3hsa-miR-316394.2876NM_001005463
EBF3hsa-miR-63694.1171NM_001005463
EBF3hsa-miR-23c94.0531NM_001005463
EBF3hsa-miR-23a-3p94.0531NM_001005463
EBF3hsa-miR-23b-3p94.0531NM_001005463
EBF3hsa-miR-218-5p93.8086NM_001005463
EBF3hsa-miR-1185-2-3p93.6994NM_001005463
EBF3hsa-miR-1185-1-3p93.6994NM_001005463
EBF3hsa-let-7f-2-3p93.6994NM_001005463
EBF3hsa-miR-96-5p93.1685NM_001005463
EBF3hsa-miR-95-5p93.1004NM_001005463
EBF3hsa-let-7f-1-3p92.5722NM_001005463
EBF3hsa-let-7b-3p92.5722NM_001005463
EBF3hsa-miR-98-3p92.5722NM_001005463
EBF3hsa-let-7a-3p92.5722NM_001005463
EBF3hsa-miR-524-5p92.4977NM_001005463
EBF3hsa-miR-520d-5p92.4977NM_001005463
EBF3hsa-miR-430292.3551NM_001005463
EBF3hsa-miR-93-3p92.3162NM_001005463
EBF3hsa-miR-4667-3p92.1318NM_001005463
EBF3hsa-miR-4694-3p92.0296NM_001005463
EBF3hsa-miR-1211791.5584NM_001005463
EBF3hsa-miR-1213391.5564NM_001005463
EBF3hsa-miR-1271-5p91.5564NM_001005463
EBF3hsa-miR-57391.1806NM_001005463
EBF3hsa-miR-3616-5p91.1806NM_001005463
EBF3hsa-miR-605-3p91.0289NM_001005463
EBF3hsa-miR-338-5p90.6085NM_001005463
EBF3hsa-miR-4799-5p90.3525NM_001005463
EBF3hsa-miR-5585-5p89.7405NM_001005463
EBF3hsa-miR-607189.0618NM_001005463
EBF3hsa-miR-364688.7975NM_001005463
EBF3hsa-miR-6739-5p88.2465NM_001005463
EBF3hsa-miR-6733-5p88.2465NM_001005463
EBF3hsa-miR-519e-5p87.9531NM_001005463
EBF3hsa-miR-515-5p87.9531NM_001005463
EBF3hsa-miR-582-5p87.7545NM_001005463
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Motifs and transcription factors (TFs) regulating EBF3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
EBF3taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
EBF3kznf__ZNF777_Imbeault2017_RP_ChIP-seqZNF777 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."