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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: DPH3

Summary for DPH3

Gene informationGene symbol

DPH3

Ensembl ID

ENSG00000154813

Entrez ID

285381

Gene namediphthamide biosynthesis 3
SynonymsDELGIP|DELGIP1|DESR1|DPH3A|KTI11|MGC20197|ZCSL2
Gene typeprotein_coding
UniProtAcc

Q96FX2


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Dataset with differentially expressed gene: DPH3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.5333937.01e-45

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.55860.00e+00

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.4018963.57e-19

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.2663121.49e-09

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.388924.05e-30

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells0.4223390.00e+00

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Expression of DPH3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to DPH3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating DPH3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
DPH3hsa-miR-130a-5p97.8868NM_001047434
DPH3hsa-miR-143-5p96.5541NM_001047434
DPH3hsa-miR-4753-3p95.6174NM_001047434
DPH3hsa-miR-3120-3p94.7437NM_001047434
DPH3hsa-miR-545-3p94.2258NM_001047434
DPH3hsa-miR-130b-5p93.5022NM_001047434
DPH3hsa-miR-6857-3p90.8722NM_001047434
DPH3hsa-miR-477390.6053NM_001047434
DPH3hsa-miR-2115-5p90.0511NM_001047434
DPH3hsa-miR-590-3p89.9531NM_001047434
DPH3hsa-miR-432889.729NM_001047434
DPH3hsa-miR-3622b-3p87.3893NM_001047434
DPH3hsa-miR-3622a-3p87.3893NM_001047434
DPH3hsa-miR-450086.4489NM_001047434
DPH3hsa-miR-7162-3p84.997NM_001047434
DPH3hsa-miR-50783.1911NM_001047434
DPH3hsa-miR-6809-3p82.1467NM_001047434
DPH3hsa-miR-312881.9969NM_001047434
DPH3hsa-miR-7162-5p81.8473NM_001047434
DPH3hsa-miR-61081.6125NM_001047434
DPH3hsa-miR-6765-3p80.386NM_001047434
DPH3hsa-let-7c-5p80.3167NM_001047434
DPH3hsa-let-7i-5p80.3167NM_001047434
DPH3hsa-miR-98-5p80.3167NM_001047434
DPH3hsa-let-7b-5p80.3167NM_001047434
DPH3hsa-let-7f-5p80.3167NM_001047434
DPH3hsa-let-7e-5p80.3167NM_001047434
DPH3hsa-let-7g-5p80.3167NM_001047434
DPH3hsa-let-7a-5p80.3167NM_001047434
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Motifs and transcription factors (TFs) regulating DPH3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
DPH3taipale_tf_pairs__TEAD4_ETV1_RSCGGAAATRCM_CAPETV1; TEAD4 (directAnnotation).
DPH3taipale_tf_pairs__TEAD4_ETV4_RCCGGAAATRCC_CAPETV4; TEAD4 (directAnnotation).
DPH3taipale_tf_pairs__TEAD4_ERG_RSCGGAAATRCC_CAP_reprERG; TEAD4 (directAnnotation).
DPH3metacluster_81.7CREB1 (directAnnotation).
DPH3metacluster_57.3ARNT; ATF3; ATF3; ATF3; ATF3; BHLHE40; BHLHE40; BHLHE40; BHLHE41; BHLHE41; BHLHE41; MITF; MITF; MITF; MLX; MLXIPL; SREBF1; SREBF1; SREBF1; SREBF1; SREBF2; SREBF2; SREBF2; TFE3; TFEC; USF1; USF1; USF1; USF1; USF1; USF1; USF1; USF1; USF1; USF2; USF2; USF2; USF2; USF2; USF2; USF2; USF2; USF2; USF2; USF2; USF2; USF2; ZNF507 (directAnnotation). ARNTL; BHLHE40; BHLHE40; BHLHE41; HELT; HES1; HES2; HES3; HES5; HES6; HES7; HEY1; HEY2; HEYL; MLX; MLX; SREBF1; SREBF2; TFE3; USF1; USF1; USF2; USF2 (inferredBy_Orthology).
DPH3taipale__ELK1_full_NACTTCCGSCGGAARMN_reprELK1 (directAnnotation).
DPH3taipale_tf_pairs__HOXB2_ETV1_ACCGGAAATGA_CAPETV1; HOXB2 (directAnnotation).
DPH3taipale_tf_pairs__ELK1_FOXI1_RSCGGATGTKKN_CAPELK1; FOXI1 (directAnnotation).
DPH3taipale_tf_pairs__POU2F1_ETV1_NCCGGATATGCAN_CAP_reprETV1; POU2F1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."