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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: CYBRD1

Summary for CYBRD1

Gene informationGene symbol

CYBRD1

Ensembl ID

ENSG00000071967

Entrez ID

79901

Gene namecytochrome b reductase 1
SynonymsCYB561A2|DCYTB|FLJ23462|FRRS3
Gene typeprotein_coding
UniProtAcc

Q53TN4


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Dataset with differentially expressed gene: CYBRD1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells0.9484981.31e-02

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells0.3003811.91e-19

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells1.070530.00e+00

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Expression of CYBRD1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CYBRD1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating CYBRD1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CYBRD1hsa-miR-316398.1478NM_001256909
CYBRD1hsa-miR-506-5p98.0172NM_001256909
CYBRD1hsa-miR-548m97.7097NM_001256909
CYBRD1hsa-miR-4760-5p97.594NM_001127383
CYBRD1hsa-miR-684497.1406NM_001127383
CYBRD1hsa-miR-806197.1233NM_001127383
CYBRD1hsa-miR-120896.7692NM_001127383
CYBRD1hsa-miR-302e96.2179NM_001256909
CYBRD1hsa-miR-365995.779NM_001256909
CYBRD1hsa-miR-4659b-3p95.1031NM_001127383
CYBRD1hsa-miR-4659a-3p95.1031NM_001127383
CYBRD1hsa-miR-2355-3p94.0156NM_001127383
CYBRD1hsa-miR-470593.6878NM_001127383
CYBRD1hsa-miR-368593.6837NM_001256909
CYBRD1hsa-miR-188-5p93.3804NM_001256909
CYBRD1hsa-miR-6866-3p93.3434NM_001256909
CYBRD1hsa-miR-127993.0851NM_001256909
CYBRD1hsa-miR-806592.7868NM_001256909
CYBRD1hsa-miR-57792.5112NM_001127383
CYBRD1hsa-miR-302a-3p92.2062NM_001256909
CYBRD1hsa-miR-302d-3p92.2062NM_001256909
CYBRD1hsa-miR-302c-3p92.2062NM_001256909
CYBRD1hsa-miR-302b-3p92.2062NM_001256909
CYBRD1hsa-miR-807092.1003NM_001256909
CYBRD1hsa-miR-372-3p91.8851NM_001256909
CYBRD1hsa-miR-520a-3p91.8851NM_001256909
CYBRD1hsa-miR-520c-3p91.8851NM_001256909
CYBRD1hsa-miR-520b-3p91.8851NM_001256909
CYBRD1hsa-miR-520d-3p91.8851NM_001256909
CYBRD1hsa-miR-373-3p91.8851NM_001256909
CYBRD1hsa-miR-520e-3p91.8851NM_001256909
CYBRD1hsa-miR-94491.2048NM_001127383
CYBRD1hsa-miR-556-3p90.9635NM_001127383
CYBRD1hsa-miR-4645-3p90.7361NM_001127383
CYBRD1hsa-miR-468690.4865NM_001256909
CYBRD1hsa-miR-61089.9357NM_001127383
CYBRD1hsa-miR-3121-3p89.8864NM_001127383
CYBRD1hsa-miR-335-3p88.9714NM_001127383
CYBRD1hsa-miR-519d-3p88.9413NM_001256909
CYBRD1hsa-miR-93-5p88.9413NM_001256909
CYBRD1hsa-miR-106a-5p88.9413NM_001256909
CYBRD1hsa-miR-20b-5p88.9413NM_001256909
CYBRD1hsa-miR-17-5p88.9413NM_001256909
CYBRD1hsa-miR-55988.762NM_001256909
CYBRD1hsa-miR-526b-3p88.5582NM_001256909
CYBRD1hsa-miR-20a-5p88.3446NM_001256909
CYBRD1hsa-miR-106b-5p88.3446NM_001256909
CYBRD1hsa-miR-1213687.3975NM_001256909
CYBRD1hsa-miR-4446-3p87.3804NM_001127383
CYBRD1hsa-miR-155-3p87.1549NM_001256909
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Motifs and transcription factors (TFs) regulating CYBRD1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CYBRD1kznf__ZBTB14_Schmitges2016_RCADEZBTB14 (directAnnotation).
CYBRD1transfac_pro__M04617ZBTB7A (directAnnotation).
CYBRD1metacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
CYBRD1taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
CYBRD1taipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
CYBRD1transfac_pro__M07387ZBTB7A (directAnnotation).
CYBRD1transfac_pro__M07436WT1 (directAnnotation).
CYBRD1transfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
CYBRD1transfac_pro__M00716ZBTB14 (directAnnotation).
CYBRD1swissregulon__hs__CHD1CHD1 (directAnnotation).
CYBRD1hdpi__HIP2UBE2K (directAnnotation).
CYBRD1taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
CYBRD1metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
CYBRD1transfac_pro__M04893TAF1 (directAnnotation).
CYBRD1transfac_pro__M03876ZBTB33 (directAnnotation).
CYBRD1metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
CYBRD1metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
CYBRD1transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
CYBRD1metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
CYBRD1metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
CYBRD1taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
CYBRD1transfac_pro__M00652NRF1 (directAnnotation).
CYBRD1transfac_pro__M04918EGR1 (directAnnotation).
CYBRD1jaspar__MA0079.5SP1 (directAnnotation).
CYBRD1kznf__KLF1_Barrera2016.2_PBMKLF1 (directAnnotation).
CYBRD1transfac_pro__M01253CNOT3 (directAnnotation).
CYBRD1transfac_pro__M04817ZBTB33 (directAnnotation).
CYBRD1swissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
CYBRD1transfac_pro__M05712ZNF134 (directAnnotation).
CYBRD1cisbp__M07938E2F1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."