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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: CYB5R4

Summary for CYB5R4

Gene informationGene symbol

CYB5R4

Ensembl ID

ENSG00000065615

Entrez ID

51167

Gene namecytochrome b5 reductase 4
Synonymsb5+b5R|dJ676J13.1|NCB5OR
Gene typeprotein_coding
UniProtAcc

Q7L1T6


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Dataset with differentially expressed gene: CYB5R4

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.2936142.40e-12

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.2833566.73e-15

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells-0.25557.05e-08

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Expression of CYB5R4 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CYB5R4

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating CYB5R4

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CYB5R4hsa-miR-471996.7066NM_016230
CYB5R4hsa-miR-54396.0574NM_016230
CYB5R4hsa-miR-120094.0076NM_016230
CYB5R4hsa-miR-365893.9503NM_016230
CYB5R4hsa-miR-7844-5p93.6059NM_016230
CYB5R4hsa-miR-544b92.3233NM_016230
CYB5R4hsa-miR-137-3p91.5682NM_016230
CYB5R4hsa-miR-314391.3458NM_016230
CYB5R4hsa-miR-148a-3p91.261NM_016230
CYB5R4hsa-miR-152-3p91.261NM_016230
CYB5R4hsa-miR-148b-3p91.261NM_016230
CYB5R4hsa-miR-3689a-5p91.0946NM_016230
CYB5R4hsa-miR-3689e91.0946NM_016230
CYB5R4hsa-miR-3689b-5p91.0946NM_016230
CYB5R4hsa-miR-3689f91.0946NM_016230
CYB5R4hsa-miR-3129-5p90.519NM_016230
CYB5R4hsa-miR-199b-3p90.519NM_016230
CYB5R4hsa-miR-199a-3p90.519NM_016230
CYB5R4hsa-miR-744-3p88.8586NM_016230
CYB5R4hsa-miR-394188.5205NM_016230
CYB5R4hsa-miR-211787.926NM_016230
CYB5R4hsa-miR-57787.6441NM_016230
CYB5R4hsa-let-7c-3p87.1389NM_016230
CYB5R4hsa-miR-432486.8572NM_016230
CYB5R4hsa-miR-4742-3p86.6119NM_016230
CYB5R4hsa-miR-569686.2489NM_016230
CYB5R4hsa-miR-432085.9878NM_016230
CYB5R4hsa-miR-590-3p85.7526NM_016230
CYB5R4hsa-miR-6809-5p85.2095NM_016230
CYB5R4hsa-miR-96-3p84.7587NM_016230
CYB5R4hsa-miR-848584.6989NM_016230
CYB5R4hsa-miR-378a-5p84.6859NM_016230
CYB5R4hsa-miR-302c-5p83.787NM_016230
CYB5R4hsa-miR-1213682.563NM_016230
CYB5R4hsa-miR-428282.0926NM_016230
CYB5R4hsa-miR-520f-3p80.9176NM_016230
CYB5R4hsa-miR-4659a-5p80.3968NM_016230
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Motifs and transcription factors (TFs) regulating CYB5R4

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CYB5R4taipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
CYB5R4metacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
CYB5R4metacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
CYB5R4metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
CYB5R4taipale_tf_pairs__FOXO1_ELK3_RCCGGAWGTKKW_CAPELK3; FOXO1 (directAnnotation).
CYB5R4jaspar__MA1483.2ELF2 (directAnnotation).
CYB5R4metacluster_166.2ELK4; ETS1; ETS1; ETV1; ETV3; ETV4; ETV5; ETV7 (directAnnotation). GABPA (inferredBy_Orthology).
CYB5R4transfac_pro__M04826EP300 (directAnnotation).
CYB5R4taipale_tf_pairs__ELK1_HOXA1_RCCGGAAGTAATTA_HTELK1; HOXA1 (directAnnotation).
CYB5R4metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
CYB5R4taipale_tf_pairs__ELF2_NATGCGGAAGTR_HTELF2 (directAnnotation).
CYB5R4cisbp__M08198ELF1 (directAnnotation).
CYB5R4taipale_tf_pairs__ERF_FOXI1_RSCGGATGTTKWN_CAP_reprERF; FOXI1 (directAnnotation).
CYB5R4taipale_tf_pairs__ETV2_RFX5_NNNTTCCGSNNNNGCAACNN_CAP_reprETV2; RFX5 (directAnnotation).
CYB5R4taipale_tf_pairs__ELK1_EOMES_RSCGGAANNAGGYGYNA_CAP_reprELK1; EOMES (directAnnotation).
CYB5R4taipale_tf_pairs__ETV2_FOXO6_RCCGGATGTTKWN_CAPETV2; FOXO6 (directAnnotation).
CYB5R4taipale_tf_pairs__TEAD4_ETV1_RSCGGAAATRCM_CAPETV1; TEAD4 (directAnnotation).
CYB5R4hdpi__ELF2ELF2 (directAnnotation).
CYB5R4metacluster_183.4ETS1 (inferredBy_Orthology).
CYB5R4taipale_tf_pairs__ELK1_TEF_NSCGGAWNTTACGTAAN_CAPELK1; TEF (directAnnotation).
CYB5R4hdpi__FLI1FLI1 (directAnnotation).
CYB5R4swissregulon__mm__E2f7E2F7 (inferredBy_Orthology).
CYB5R4transfac_pro__M00492STAT1 (directAnnotation).
CYB5R4transfac_pro__M04748GABPA (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."