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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: CYB561

Summary for CYB561

Gene informationGene symbol

CYB561

Ensembl ID

ENSG00000008283

Entrez ID

1534

Gene namecytochrome b561
SynonymsCYB561A1|FRRS2
Gene typeprotein_coding
UniProtAcc

P49447


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Dataset with differentially expressed gene: CYB561

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.3445850.00e+00

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.2542383.42e-13

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.3091943.27e-13

GSE104987

MCF7 cell lineCell lineBreast cancerER+ breast cancerTargeted therapyKDM5-C70NAMalignant cells0.3227523.78e-18

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.8023740.00e+00

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells-1.665190.00e+00

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Expression of CYB561 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CYB561

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating CYB561

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CYB561hsa-miR-6736-3p89.2331NM_001017917
CYB561hsa-miR-30d-5p87.8249NM_001017916
CYB561hsa-miR-30e-5p87.8249NM_001017916
CYB561hsa-miR-30a-5p87.8249NM_001017916
CYB561hsa-miR-30b-5p87.8249NM_001017916
CYB561hsa-miR-30c-5p87.8249NM_001017916
CYB561hsa-miR-58882.5949NM_001017917
CYB561hsa-miR-4701-5p82.5949NM_001017917
CYB561hsa-miR-472980.4834NM_001017916
CYB561hsa-miR-182-5p80.0492NM_001017917
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Motifs and transcription factors (TFs) regulating CYB561

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CYB561metacluster_130.15ARID5B; ARID5B; BPTF (directAnnotation).
CYB561swissregulon__hs__FUBP1FUBP1 (directAnnotation).
CYB561taipale_tf_pairs__ELK1_TEF_NSCGGAWNTTACGTAAN_CAPELK1; TEF (directAnnotation).
CYB561transfac_pro__M06512ZNF461 (directAnnotation).
CYB561transfac_pro__M04844MAX (directAnnotation).
CYB561swissregulon__hs__FOXD3FOXD3 (directAnnotation).
CYB561metacluster_8.1ZNF382 (directAnnotation).
CYB561taipale_tf_pairs__ETV5_CEBPD_NSCGGANNTTRCGYAAN_CAPCEBPD; ETV5 (directAnnotation).
CYB561hdpi__RFXANKRFXANK (directAnnotation).
CYB561metacluster_188.3FOXJ3; FOXJ3; FOXP1; FOXP1 (directAnnotation). FOXO1; FOXO4; FOXP1 (inferredBy_Orthology).
CYB561metacluster_77.11SOX12 (directAnnotation).
CYB561transfac_public__M00278GATA1; LDB1; LMO2; TAL1; TCF3 (inferredBy_Orthology).
CYB561transfac_pro__M03813POU3F3 (directAnnotation).
CYB561hocomoco__MNX1_HUMAN.H11MO.0.DMNX1 (directAnnotation).
CYB561transfac_pro__M06074ZNF732 (directAnnotation).
CYB561transfac_pro__M02843BBX (inferredBy_Orthology).
CYB561jaspar__MA1933.1SREBF2 (directAnnotation).
CYB561transfac_pro__M06035ZNF749 (directAnnotation).
CYB561kznf__PRDM1_modENCODE.2_ChIP-seqPRDM1 (directAnnotation).
CYB561kznf__ZNF282_Imbeault2017_OM_RCADEZNF282 (directAnnotation).
CYB561metacluster_52.11ZNF184 (directAnnotation).
CYB561metacluster_7.13ZFX (directAnnotation).
CYB561kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
CYB561jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
CYB561taipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
CYB561metacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
CYB561metacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
CYB561swissregulon__hs__ELF2ELF2 (directAnnotation).
CYB561swissregulon__hs__ETV6ETV6 (directAnnotation).
CYB561taipale_tf_pairs__HOXB2_ETV4_ACCGGAAATGAN_CAPETV4; HOXB2 (directAnnotation).
CYB561taipale_tf_pairs__ELK1_HOXA3_RSCGGTAATKR_CAP_reprELK1; HOXA3 (directAnnotation).
CYB561taipale_tf_pairs__ETV2_FOXO6_RCCGGATGTTKWN_CAPETV2; FOXO6 (directAnnotation).
CYB561taipale__ELK1_full_NACTTCCGSCGGAARMN_reprELK1 (directAnnotation).
CYB561taipale_tf_pairs__ELF2_NATGCGGAAGTR_HTELF2 (directAnnotation).
CYB561taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."