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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: CWC27

Summary for CWC27

Gene informationGene symbol

CWC27

Ensembl ID

ENSG00000153015

Entrez ID

10283

Gene nameCWC27 spliceosome associated cyclophilin
SynonymsNY-CO-10|SDCCAG-10|SDCCAG10
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: CWC27

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.4376590.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells0.2583150.00e+00

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.2827812.61e-13

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.2882573.39e-07

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.4743561.08e-29

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Expression of CWC27 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CWC27

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating CWC27

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CWC27hsa-miR-4694-3p97.4529NM_001297645
CWC27hsa-miR-190a-5p96.5343NM_001297645
CWC27hsa-miR-190b-5p96.5343NM_001297645
CWC27hsa-miR-4482-3p95.6689NM_001318000
CWC27hsa-miR-4766-3p94.9721NM_005869
CWC27hsa-miR-205-3p93.6307NM_005869
CWC27hsa-miR-144-3p91.8831NM_001297645
CWC27hsa-miR-526b-5p91.1087NM_001297645
CWC27hsa-miR-153-5p91.0848NM_001318000
CWC27hsa-miR-426789.7538NM_001318000
CWC27hsa-miR-6885-3p89.6447NM_001318000
CWC27hsa-miR-568989.2528NM_001318000
CWC27hsa-miR-3942-3p89.2244NM_005869
CWC27hsa-miR-3160-5p89.0761NM_001318000
CWC27hsa-miR-6780a-3p87.8581NM_001318000
CWC27hsa-miR-374a-5p87.5967NM_005869
CWC27hsa-miR-447685.9067NM_001297645
CWC27hsa-miR-664a-3p85.7342NM_001297645
CWC27hsa-miR-4474-5p85.3422NM_001297645
CWC27hsa-miR-1212385.2539NM_001297645
CWC27hsa-miR-4738-3p85.2413NM_001318000
CWC27hsa-miR-4749-5p85.0745NM_001297645
CWC27hsa-miR-470685.0745NM_001297645
CWC27hsa-miR-374b-5p84.915NM_005869
CWC27hsa-miR-3622b-5p84.6155NM_001318000
CWC27hsa-miR-3529-3p84.3989NM_001318000
CWC27hsa-miR-453384.1461NM_005869
CWC27hsa-miR-5692b84.0622NM_005869
CWC27hsa-miR-5692c84.0622NM_005869
CWC27hsa-miR-502-3p83.8734NM_001318000
CWC27hsa-miR-501-3p83.8734NM_001318000
CWC27hsa-miR-4999-3p82.4781NM_001297645
CWC27hsa-miR-607182.4113NM_001318000
CWC27hsa-miR-3190-3p81.8834NM_005869
CWC27hsa-miR-5589-5p81.8517NM_001318000
CWC27hsa-miR-6764-5p81.1169NM_001318000
CWC27hsa-miR-613380.8596NM_001318000
CWC27hsa-miR-613080.8596NM_001318000
CWC27hsa-miR-451080.8596NM_001318000
CWC27hsa-miR-612980.8596NM_001318000
CWC27hsa-miR-612780.8596NM_001318000
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Motifs and transcription factors (TFs) regulating CWC27

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CWC27taipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
CWC27hdpi__FLI1FLI1 (directAnnotation).
CWC27transfac_pro__M04826EP300 (directAnnotation).
CWC27taipale_tf_pairs__ELF2_NATGCGGAAGTR_HTELF2 (directAnnotation).
CWC27metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
CWC27taipale_tf_pairs__ELK1_FOXI1_RSCGGATGTKKN_CAPELK1; FOXI1 (directAnnotation).
CWC27taipale_tf_pairs__ETV5_HOXA2_RSCGGWAATKR_CAPETV5; HOXA2 (directAnnotation).
CWC27taipale_tf_pairs__ETV2_FOXO6_RCCGGATGTTKWN_CAPETV2; FOXO6 (directAnnotation).
CWC27metacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
CWC27taipale_tf_pairs__ETV5_FOXI1_RSCGGATGTTGN_CAPETV5; FOXI1 (directAnnotation).
CWC27taipale_tf_pairs__ERF_FOXI1_RSCGGATGTTKWN_CAP_reprERF; FOXI1 (directAnnotation).
CWC27taipale_tf_pairs__ETV2_FOXI1_RNCGGAANNAAACA_CAP_reprETV2; FOXI1 (directAnnotation).
CWC27cisbp__M02645ETS1 (directAnnotation).
CWC27jaspar__MA1708.1ETV7 (directAnnotation).
CWC27metacluster_183.4ETS1 (inferredBy_Orthology).
CWC27taipale_tf_pairs__FOXO1_ELK1_TGTTGCCGGANNN_CAPELK1; FOXO1 (directAnnotation).
CWC27taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
CWC27taipale_tf_pairs__ERF_FOXI1_TGTTKMCGGAWRN_CAP_reprERF; FOXI1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."