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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: CWC25

Summary for CWC25

Gene informationGene symbol

CWC25

Ensembl ID

ENSG00000276761

Entrez ID

54883

Gene nameCWC25 spliceosome associated protein homolog
SynonymsCCDC49|FLJ20291
Gene typeprotein_coding
UniProtAcc

Q9NXE8


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Dataset with differentially expressed gene: CWC25

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.3336263.28e-27

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.2654570.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells-0.437140.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD4+ T cells-0.2694220.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.5790360.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD8+ T cells-0.3012984.69e-36

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.2756291.76e-15

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Expression of CWC25 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CWC25

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating CWC25

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CWC25hsa-miR-431197.4891NM_017748
CWC25hsa-miR-340-5p96.4594NM_017748
CWC25hsa-miR-127695.0738NM_017748
CWC25hsa-miR-429995.0028NM_017748
CWC25hsa-miR-312394.8793NM_017748
CWC25hsa-miR-556-3p94.7539NM_017748
CWC25hsa-miR-430893.8314NM_017748
CWC25hsa-miR-93593.3667NM_017748
CWC25hsa-miR-493-5p93.1688NM_017748
CWC25hsa-miR-58392.9986NM_017748
CWC25hsa-miR-3158-3p91.8443NM_017748
CWC25hsa-miR-4680-5p91.4407NM_017748
CWC25hsa-miR-364690.0212NM_017748
CWC25hsa-miR-612489.3424NM_017748
CWC25hsa-miR-524-5p88.2592NM_017748
CWC25hsa-miR-520d-5p88.2592NM_017748
CWC25hsa-miR-6773-3p87.6121NM_017748
CWC25hsa-miR-3130-5p87.5647NM_017748
CWC25hsa-miR-290987.2966NM_017748
CWC25hsa-miR-4707-5p85.3238NM_017748
CWC25hsa-miR-4482-5p84.9447NM_017748
CWC25hsa-miR-6791-5p84.169NM_017748
CWC25hsa-miR-6778-3p82.5712NM_017748
CWC25hsa-miR-6792-5p82.0349NM_017748
CWC25hsa-miR-751580.6519NM_017748
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Motifs and transcription factors (TFs) regulating CWC25

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CWC25metacluster_126.3LIN28B; LIN28B (directAnnotation).
CWC25taipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
CWC25jaspar__MA1483.2ELF2 (directAnnotation).
CWC25metacluster_33.8BRCA1; CHD2; CHD2; ETS1; NR3C1; ZBED1; ZBED1; ZBED1; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33 (directAnnotation). CHD2; ZBTB33 (inferredBy_Orthology).
CWC25cisbp__M08198ELF1 (directAnnotation).
CWC25taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
CWC25transfac_pro__M02913SP140 (inferredBy_Orthology).
CWC25jaspar__MA0604.1ATF1 (inferredBy_Orthology).
CWC25transfac_pro__M02865GMEB1 (inferredBy_Orthology).
CWC25taipale_cyt_meth__CREB1_NRTGACGTN_eDBD_reprCREB1 (directAnnotation).
CWC25hdpi__TIMELESSTIMELESS (directAnnotation).
CWC25metacluster_19.6GMEB1 (directAnnotation). GMEB1 (inferredBy_Orthology).
CWC25metacluster_111.3ATF1; ATF3; CREB1; CREB1; CREB1; CREB1; CREB1; CREM; CREM; CREM; CREM; E4F1; E4F1 (directAnnotation). CREB1; CREB1; CREM; JDP2 (inferredBy_Orthology).
CWC25transfac_pro__M01861ATF1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."