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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: CTNND1

Summary for CTNND1

Gene informationGene symbol

CTNND1

Ensembl ID

ENSG00000198561

Entrez ID

1500

Gene namecatenin delta 1
SynonymsCTNND|KIAA0384|p120|p120cas|p120ctn
Gene typeprotein_coding
UniProtAcc

O60716


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Dataset with differentially expressed gene: CTNND1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.4087498.19e-28

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells0.2800265.81e-05

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.2911238.77e-38

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.536956.54e-43

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Expression of CTNND1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CTNND1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

CTNND1

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating CTNND1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CTNND1hsa-miR-118498.8737NM_001085458
CTNND1hsa-miR-651-3p97.9397NM_001206887
CTNND1hsa-miR-5006-5p97.0828NM_001085458
CTNND1hsa-miR-506-3p96.8291NM_001085458
CTNND1hsa-miR-124-3p96.8291NM_001085458
CTNND1hsa-miR-425995.6766NM_001206887
CTNND1hsa-miR-4760-5p94.7555NM_001206887
CTNND1hsa-miR-442294.284NM_001085458
CTNND1hsa-miR-806194.1848NM_001206887
CTNND1hsa-miR-120293.6137NM_001085458
CTNND1hsa-miR-397293.6137NM_001085458
CTNND1hsa-miR-29893.1338NM_001206887
CTNND1hsa-miR-197-3p92.7235NM_001085458
CTNND1hsa-miR-548e-5p92.309NM_001085458
CTNND1hsa-miR-120592.2204NM_001085458
CTNND1hsa-miR-10394-5p92.2204NM_001085458
CTNND1hsa-miR-1212091.4198NM_001206887
CTNND1hsa-miR-1468-3p91.1297NM_001206887
CTNND1hsa-miR-5582-5p91.0803NM_001085458
CTNND1hsa-miR-548x-3p91.0771NM_001206887
CTNND1hsa-miR-548aj-3p91.0771NM_001206887
CTNND1hsa-miR-520f-5p90.9677NM_001206887
CTNND1hsa-miR-7113-5p90.295NM_001206887
CTNND1hsa-miR-518c-5p90.2797NM_001206887
CTNND1hsa-miR-3158-5p90.1336NM_001085458
CTNND1hsa-miR-548ae-3p90.0937NM_001206887
CTNND1hsa-miR-548aq-3p90.0937NM_001206887
CTNND1hsa-miR-548j-3p90.0937NM_001206887
CTNND1hsa-miR-548ah-3p90.0937NM_001206887
CTNND1hsa-miR-548am-3p90.0937NM_001206887
CTNND1hsa-miR-4723-5p89.2928NM_001206887
CTNND1hsa-miR-17-3p89.2603NM_001085458
CTNND1hsa-miR-548aw89.207NM_001206887
CTNND1hsa-miR-3065-5p89.1638NM_001085458
CTNND1hsa-miR-429487.682NM_001206887
CTNND1hsa-miR-6752-3p87.38NM_001085458
CTNND1hsa-miR-569887.0996NM_001206887
CTNND1hsa-miR-6870-5p87.0996NM_001206887
CTNND1hsa-miR-7111-5p87.0996NM_001206887
CTNND1hsa-miR-122b-5p87.0857NM_001085458
CTNND1hsa-miR-6794-5p86.6402NM_001206887
CTNND1hsa-miR-4716-3p86.6402NM_001206887
CTNND1hsa-miR-5195-3p86.2091NM_001085458
CTNND1hsa-miR-145-5p86.2091NM_001085458
CTNND1hsa-miR-570286.1771NM_001085458
CTNND1hsa-miR-6878-5p86.1566NM_001206887
CTNND1hsa-miR-127686.0675NM_001206887
CTNND1hsa-miR-6892-5p84.7436NM_001206887
CTNND1hsa-miR-30c-1-3p84.4267NM_001206887
CTNND1hsa-miR-6788-5p84.4267NM_001206887
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Motifs and transcription factors (TFs) regulating CTNND1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CTNND1metacluster_174.3MBD2; NFYA; NFYB; NFYC; PBX3 (directAnnotation).
CTNND1metacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
CTNND1kznf__ZNF282_Imbeault2017_OM_RCADEZNF282 (directAnnotation).
CTNND1transfac_pro__M05788ZNF569 (inferredBy_Orthology).
CTNND1jaspar__MA1596.1ZNF460 (directAnnotation).
CTNND1taipale_tf_pairs__GCM1_ELK1_RTGCGGGCGGAAGTN_CAP_2ELK1; GCM1 (directAnnotation).
CTNND1jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
CTNND1cisbp__M00788ZFY (inferredBy_Orthology).
CTNND1hdpi__ZNF304ZNF304 (directAnnotation).
CTNND1transfac_pro__M02844BCL6B (inferredBy_Orthology).
CTNND1metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
CTNND1transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
CTNND1metacluster_174.6NFYA; NFYB; NFYB; NFYC (directAnnotation).
CTNND1jaspar__MA0502.2NFYB (directAnnotation).
CTNND1metacluster_144.8ZNF30; ZNF30 (directAnnotation).
CTNND1metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
CTNND1cisbp__M01863ZNF711 (inferredBy_Orthology).
CTNND1taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
CTNND1transfac_pro__M06173ZNF85 (directAnnotation).
CTNND1taipale_tf_pairs__GCM1_ETV4_RTGCGGGCGGAAGTR_CAPETV4; GCM1 (directAnnotation).
CTNND1transfac_public__M00114CREB1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."

1LncRNA MALAT1 Depressed Chemo-Sensitivity of NSCLC Cells through Directly Functioning on miR-197-3p/p120 Catenin Axis