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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: CSNK1D

Summary for CSNK1D

Gene informationGene symbol

CSNK1D

Ensembl ID

ENSG00000141551

Entrez ID

1453

Gene namecasein kinase 1 delta
SynonymsCKID|CKIdelta|HCKID
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: CSNK1D

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.3278565.41e-17

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.2694730.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.5428450.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells-0.3021986.97e-34

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells-0.323090.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.3361230.00e+00

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Expression of CSNK1D in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CSNK1D

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating CSNK1D

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CSNK1Dhsa-miR-467298.0422NM_139062
CSNK1Dhsa-miR-394193.6844NM_139062
CSNK1Dhsa-miR-429792.7587NM_139062
CSNK1Dhsa-miR-46691.8293NM_139062
CSNK1Dhsa-miR-548av-5p91.2239NM_139062
CSNK1Dhsa-miR-805491.2239NM_139062
CSNK1Dhsa-miR-548k91.2239NM_139062
CSNK1Dhsa-miR-374b-3p91.1017NM_139062
CSNK1Dhsa-miR-6882-3p89.6828NM_139062
CSNK1Dhsa-miR-548p89.5658NM_139062
CSNK1Dhsa-miR-427089.2159NM_139062
CSNK1Dhsa-miR-5581-5p88.6348NM_139062
CSNK1Dhsa-miR-444186.4057NM_139062
CSNK1Dhsa-miR-469886.3053NM_139062
CSNK1Dhsa-miR-55984.8672NM_139062
CSNK1Dhsa-miR-480184.1935NM_139062
CSNK1Dhsa-miR-6849-3p83.826NM_001893
CSNK1Dhsa-miR-95-5p83.7823NM_001893
CSNK1Dhsa-miR-18a-3p83.1922NM_001893
CSNK1Dhsa-miR-3135a81.6194NM_001893
CSNK1Dhsa-miR-6730-5p81.3917NM_001893
CSNK1Dhsa-miR-797781.197NM_139062
CSNK1Dhsa-miR-4731-3p80.4396NM_139062
CSNK1Dhsa-miR-428880.3801NM_001893
CSNK1Dhsa-miR-429480.3342NM_139062
CSNK1Dhsa-miR-548ae-5p80.331NM_139062
CSNK1Dhsa-miR-548c-5p80.331NM_139062
CSNK1Dhsa-miR-548a-5p80.331NM_139062
CSNK1Dhsa-miR-548au-5p80.331NM_139062
CSNK1Dhsa-miR-548ay-5p80.331NM_139062
CSNK1Dhsa-miR-548i80.331NM_139062
CSNK1Dhsa-miR-548b-5p80.331NM_139062
CSNK1Dhsa-miR-548bb-5p80.331NM_139062
CSNK1Dhsa-miR-548as-5p80.331NM_139062
CSNK1Dhsa-miR-548o-5p80.331NM_139062
CSNK1Dhsa-miR-548aq-5p80.331NM_139062
CSNK1Dhsa-miR-548ap-5p80.331NM_139062
CSNK1Dhsa-miR-548y80.331NM_139062
CSNK1Dhsa-miR-548d-5p80.331NM_139062
CSNK1Dhsa-miR-548ak80.331NM_139062
CSNK1Dhsa-miR-548ad-5p80.331NM_139062
CSNK1Dhsa-miR-548h-5p80.331NM_139062
CSNK1Dhsa-miR-548j-5p80.331NM_139062
CSNK1Dhsa-miR-548ab80.331NM_139062
CSNK1Dhsa-miR-548am-5p80.331NM_139062
CSNK1Dhsa-miR-548w80.331NM_139062
CSNK1Dhsa-miR-548ar-5p80.331NM_139062
CSNK1Dhsa-miR-548l80.331NM_139062
CSNK1Dhsa-miR-4766-3p80.2005NM_139062
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Motifs and transcription factors (TFs) regulating CSNK1D

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CSNK1Dmetacluster_151.2ZNF23 (directAnnotation).
CSNK1Dmetacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
CSNK1Dtransfac_pro__M05628ZNF735 (directAnnotation).
CSNK1Djaspar__MA0079.5SP1 (directAnnotation).
CSNK1Dtransfac_pro__M07397ZNF148 (directAnnotation).
CSNK1Ddbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
CSNK1Dtaipale_cyt_meth__ZNF281_NCCCCTCCCCCN_eDBD_methZNF281 (directAnnotation).
CSNK1Dhomer__GGGGGGGG_MazMAZ (directAnnotation).
CSNK1Dtransfac_pro__M01175ZBTB7B (directAnnotation).
CSNK1Dtfdimers__MD00151CHURC1 (directAnnotation).
CSNK1Dtransfac_pro__M01303SP1 (directAnnotation).
CSNK1Dtransfac_pro__M01714KLF15 (directAnnotation).
CSNK1Dtransfac_pro__M02281SP1 (directAnnotation).
CSNK1Dtransfac_public__M00491PATZ1 (directAnnotation).
CSNK1Dtaipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
CSNK1Dmetacluster_33.8BRCA1; CHD2; CHD2; ETS1; NR3C1; ZBED1; ZBED1; ZBED1; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33 (directAnnotation). CHD2; ZBTB33 (inferredBy_Orthology).
CSNK1Dmetacluster_141.6MZF1; TAF1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZNF597 (directAnnotation). TAF1; TAF1L (inferredBy_Orthology).
CSNK1Dhdpi__FLI1FLI1 (directAnnotation).
CSNK1Djaspar__MA0748.2YY2 (directAnnotation).
CSNK1Dmetacluster_144.8ZNF30; ZNF30 (directAnnotation).
CSNK1Djaspar__MA1721.1ZNF93 (directAnnotation).
CSNK1Dmetacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
CSNK1Dkznf__ZNF90_Imbeault2017_OM_RCADEZNF90 (directAnnotation).
CSNK1Dtransfac_pro__M01973PLAG1 (directAnnotation).
CSNK1Dcisbp__M00249WT1 (directAnnotation).
CSNK1Dtransfac_pro__M01122ZNF219 (directAnnotation).
CSNK1Dtfdimers__MD00391KLF4 (directAnnotation).
CSNK1Dmetacluster_163.1KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF1; KLF10; KLF10; KLF12; KLF12; KLF12; KLF13; KLF16; KLF17; KLF2; KLF3; KLF3; KLF3; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF5; KLF6; KLF6; KLF6; KLF7; KLF9; KLF9; SALL4; SP1; ZNF148; ZNF148; ZNF526 (directAnnotation). EGR4; KLF1; KLF1; KLF12; KLF12; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF3; KLF4; KLF4; KLF4; KLF4; KLF4; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF8; KLF9; SP4; SP5; SP5; SP6; SP7; SP8; SP9; ZNF526 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."