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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: CSGALNACT1

Summary for CSGALNACT1

Gene informationGene symbol

CSGALNACT1

Ensembl ID

ENSG00000147408

Entrez ID

55790

Gene namechondroitin sulfate N-acetylgalactosaminyltransferase 1
SynonymsChGn|CSGalNAcT-1|FLJ11264
Gene typeprotein_coding
UniProtAcc

Q8TDX6


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Dataset with differentially expressed gene: CSGALNACT1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisoloneprepDCs0.3375791.98e-03

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Expression of CSGALNACT1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CSGALNACT1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating CSGALNACT1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CSGALNACT1hsa-miR-5011-5p99.673NM_001130518
CSGALNACT1hsa-miR-659-3p99.1982NM_001130518
CSGALNACT1hsa-miR-478495.0866NM_018371
CSGALNACT1hsa-miR-3150b-3p95.0866NM_018371
CSGALNACT1hsa-miR-190a-3p95.0185NM_018371
CSGALNACT1hsa-miR-9-5p91.6718NM_001130518
CSGALNACT1hsa-miR-5580-5p90.8766NM_018371
CSGALNACT1hsa-miR-6868-5p88.8095NM_018371
CSGALNACT1hsa-miR-3606-3p88.7405NM_018371
CSGALNACT1hsa-miR-651-3p87.6587NM_001130518
CSGALNACT1hsa-miR-7152-3p87.5744NM_018371
CSGALNACT1hsa-miR-29b-2-5p87.3851NM_001130518
CSGALNACT1hsa-miR-299-5p86.2274NM_001130518
CSGALNACT1hsa-miR-513c-3p85.7182NM_018371
CSGALNACT1hsa-miR-513a-3p85.7182NM_018371
CSGALNACT1hsa-miR-30a-5p85.583NM_001130518
CSGALNACT1hsa-miR-30c-5p85.583NM_001130518
CSGALNACT1hsa-miR-30d-5p85.583NM_001130518
CSGALNACT1hsa-miR-30b-5p85.583NM_001130518
CSGALNACT1hsa-miR-30e-5p85.583NM_001130518
CSGALNACT1hsa-miR-153-5p85.4382NM_018371
CSGALNACT1hsa-miR-203b-3p84.072NM_018371
CSGALNACT1hsa-miR-627-3p82.8361NM_018371
CSGALNACT1hsa-miR-203a-3p80.1987NM_018371
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Motifs and transcription factors (TFs) regulating CSGALNACT1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CSGALNACT1tfdimers__MD00263STAT1; TCF7L1 (directAnnotation).
CSGALNACT1jaspar__MA1951.1FOS (directAnnotation).
CSGALNACT1transfac_pro__M06765ZNF629 (directAnnotation).
CSGALNACT1tfdimers__MD00515ARID3A; KLF4 (directAnnotation).
CSGALNACT1dbtfbs__NCOA3_MCF-7_ENCSR573OJP_merged_N2NCOA3 (directAnnotation).
CSGALNACT1transfac_pro__M05574ZFP92 (directAnnotation).
CSGALNACT1tfdimers__MD00382POU2F1; ZNF354C (directAnnotation).
CSGALNACT1hdpi__THAP5THAP5 (directAnnotation).
CSGALNACT1hdpi__ZNF326ZNF326 (directAnnotation).
CSGALNACT1transfac_pro__M06275ZNF284 (directAnnotation).
CSGALNACT1metacluster_180.3ATF2; ATF2; ATF2; ATF2; ATF3; ATF3; ATF4; ATF4; ATF6; ATF6B; ATF7; ATF7; BACH2; BATF3; BATF3; CREB1; CREB1; CREB3; FOSL1; FOSL2; JDP2; JUN; JUN; JUN; JUND; JUND; XBP1; ZBTB21 (directAnnotation). JDP2; JDP2; JUND (inferredBy_Orthology).
CSGALNACT1transfac_pro__M06737ZNF226 (directAnnotation).
CSGALNACT1transfac_pro__M05895ZNF454 (directAnnotation).
CSGALNACT1hdpi__TCEAL2TCEAL2 (directAnnotation).
CSGALNACT1metacluster_148.1ATF2; ATF2; ATF3; ATF3; ATF3; ATF3; ATF4; ATF4; ATF6; ATF6; ATF6B; ATF7; BATF3; BATF3; CREB1; CREB1; CREB1; CREB3; CREB3; CREB5; CREB5; CREB5; CREM; CREM; FOS; FOS; FOSB; FOSB; FOSB; FOSL1; JDP2; JDP2; JUN; JUN; JUN; JUNB; JUND; MAF; MAF; MAFA; MAFA; MAFF; MAFF; MAFF; MAFF; MAFG; MAFG; ZBTB21 (directAnnotation). ATF1; ATF1; ATF1; ATF1; ATF6; ATF6; ATF6; ATF6; ATF6B; ATF6B; ATF6B; ATF6B; CREB1; CREB1; CREB3; CREB3; CREB3; CREB3; CREB3L1; CREB3L1; CREB3L1; CREB3L1; CREB3L2; CREB3L2; CREB3L2; CREB3L2; CREB3L3; CREB3L3; CREB3L3; CREB3L3; CREB3L4; CREB3L4; CREB3L4; CREB3L4; CREM; CREM; CREM; CREM; JDP2; JUN; JUNB; JUND; MAFB (inferredBy_Orthology).
CSGALNACT1hocomoco__RARB_HUMAN.H11MO.0.DRARB (directAnnotation).
CSGALNACT1tfdimers__MD00158DBP; ZNF354C (directAnnotation).
CSGALNACT1metacluster_7.7SP2 (directAnnotation). KLF16 (inferredBy_Orthology).
CSGALNACT1transfac_pro__M01252E2F6 (directAnnotation).
CSGALNACT1cisbp__M01742MYF6 (inferredBy_Orthology).
CSGALNACT1taipale_tf_pairs__RFX3_SREBF2_NNRGYAACNTCACGTGAY_CAP_reprRFX3; SREBF2 (directAnnotation).
CSGALNACT1tfdimers__MD00230FOS; FOSB; FOSL1; FOSL2; JUN; JUNB; JUND; STAT1 (directAnnotation).
CSGALNACT1tfdimers__MD00082GATA1; GATA2; GATA3; GATA4; GATA5; GATA6; ZNF217 (directAnnotation).
CSGALNACT1transfac_pro__M06326ZNF841 (directAnnotation).
CSGALNACT1transfac_pro__M01841ESRRA (directAnnotation).
CSGALNACT1kznf__ZNF614_Imbeault2017_RP_ChIP-seqZNF614 (directAnnotation).
CSGALNACT1tfdimers__MD00228PDX1; TFAP4 (directAnnotation).
CSGALNACT1transfac_pro__M06611ZNF560 (directAnnotation).
CSGALNACT1taipale_tf_pairs__TFAP4_DLX3_NNCAGCTGNNNNNNNTAATTN_HTDLX3; TFAP4 (directAnnotation).
CSGALNACT1transfac_public__M00159CEBPA (directAnnotation).
CSGALNACT1transfac_pro__M06322ZNF181 (directAnnotation).
CSGALNACT1tfdimers__MD00051GABPA; STAT6 (directAnnotation).
CSGALNACT1transfac_pro__M01661HBP1 (directAnnotation).
CSGALNACT1hdpi__POU4F3POU4F3 (directAnnotation).
CSGALNACT1transfac_pro__M06257ZNF616 (directAnnotation).
CSGALNACT1transfac_pro__M05667ZNF35 (directAnnotation).
CSGALNACT1metacluster_111.4ATF1; ATF1; ATF1; ATF1; ATF1; ATF1; ATF2; ATF2; ATF2; ATF2; ATF2; ATF2; ATF2; ATF2; ATF2; ATF2; ATF3; ATF3; ATF3; ATF3; ATF3; ATF4; ATF4; ATF5; ATF6; ATF6B; ATF7; ATF7; ATF7; BATF3; BATF3; CREB1; CREB1; CREB1; CREB1; CREB1; CREB1; CREB1; CREB1; CREB1; CREB1; CREB3; CREB3L4; CREB3L4; CREB5; CREB5; CREB5; CREM; CREM; CREM; CREM; CREM; FOSB; FOSL1; FOSL1; FOSL2; JDP2; JDP2; JDP2; JUN; JUNB; JUNB; JUNB; JUND; JUND; JUND; JUND; JUND; XBP1; XBP1; XBP1; ZNF629 (directAnnotation). ATF1; ATF1; ATF1; ATF2; ATF2; ATF3; ATF6; ATF6B; ATF7; ATF7; ATF7; ATF7-NPFF; ATF7-NPFF; ATF7-NPFF; ATF7-NPFF; BATF; BATF2; BATF3; CREB1; CREB1; CREB3; CREB3L1; CREB3L2; CREB3L3; CREB3L4; CREM; FOS; FOSB; FOSL1; FOSL2; JDP2; JDP2 (inferredBy_Orthology).
CSGALNACT1nitta__so_TATCGC20NGCG_KG_NGATACGTATCN_m1_c3SIX1 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."