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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: CSF3R

Summary for CSF3R

Gene informationGene symbol

CSF3R

Ensembl ID

ENSG00000119535

Entrez ID

1441

Gene namecolony stimulating factor 3 receptor
SynonymsCD114|GCSFR
Gene typeprotein_coding
UniProtAcc

Q99062


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Dataset with differentially expressed gene: CSF3R

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelprecDCs0.313861.06e-03

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreMono/Macro0.6686550.00e+00

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreMono/Macro0.4650780.00e+00

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelprecDCs0.4543862.66e-13

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro0.4367051.32e-10

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro0.2881352.30e-04

GSE197268_Tisa-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapytisa-cel (CAR-T)preMono/Macro0.5538130.00e+00

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMono/Macro-0.345770.00e+00

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepostMono/Macro-0.3772770.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells0.5293380.00e+00

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Expression of CSF3R in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CSF3R

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

CSF3R

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating CSF3R

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CSF3Rhsa-miR-7152-3p95.4452NM_156039
CSF3Rhsa-miR-6780a-5p92.383NM_000760
CSF3Rhsa-miR-3689b-3p87.7249NM_000760
CSF3Rhsa-miR-3689a-3p87.7249NM_000760
CSF3Rhsa-miR-1273h-5p87.7249NM_000760
CSF3Rhsa-miR-3689c87.7249NM_000760
CSF3Rhsa-miR-6779-5p87.7249NM_000760
CSF3Rhsa-miR-30b-3p87.7249NM_000760
CSF3Rhsa-miR-4650-5p82.6657NM_156039
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Motifs and transcription factors (TFs) regulating CSF3R

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CSF3Rhomer__ATTGCGCAAC_CEBPCEBPB (inferredBy_Orthology).
CSF3Rmetacluster_46.4CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPE; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; CEBPG; DBP; DBP; EP300; GATAD2A; HES2 (directAnnotation). CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPA; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPB; CEBPD; CEBPD; CEBPD; CEBPD; CEBPD; CEBPE; CEBPE; CEBPE; CEBPG; CEBPG; HLF; HLF (inferredBy_Orthology).
CSF3Rtransfac_pro__M06342ZNF329 (inferredBy_Orthology).
CSF3Rtransfac_pro__M04761HSF1 (directAnnotation).
CSF3Rmetacluster_156.3DBP; DBP; DBP; DBP; DBP; DBP; DBP; DBP; HLF; HLF; HLF; HLF; HLF; HLF; HLF; NFIL3; NFIL3; NFIL3; NFIL3; NFIL3; NFIL3; NFIL3; TEF; TEF; TEF; TEF; TEF (directAnnotation). DBP; DBP; DBP; DBP; DBP; HLF; HLF; HLF; HLF; HLF; NFIL3; NFIL3; NFILZ; NFILZ; TEF; TEF; TEF; TEF (inferredBy_Orthology).
CSF3Rtransfac_pro__M05469SALL1 (directAnnotation).
CSF3Rmetacluster_168.11ZNF771; ZNF771 (directAnnotation).
CSF3Rtaipale_cyt_meth__VENTX_CGATTATCG_FL_reprVENTX (directAnnotation).
CSF3Rmetacluster_46.5HLF; TEF (directAnnotation).
CSF3Rmetacluster_194.1BARHL1; BARHL2; BARHL2; BARHL2; ZNF354A; ZNF354A (directAnnotation). BARHL1 (inferredBy_Orthology).
CSF3Rmetacluster_143.19PLAGL2; ZNF740 (directAnnotation).
CSF3Rtfdimers__MD00038TFAP2C (directAnnotation).
CSF3Rmetacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
CSF3Rcisbp__M00341PAX6 (directAnnotation).
CSF3Rswissregulon__hs__PATZ1PATZ1 (directAnnotation).
CSF3Rtaipale_tf_pairs__ELK1_SPDEF_NSMGGACGGAYNTCCKSN_CAPELK1; SPDEF (directAnnotation).
CSF3Rmetacluster_2.8IRF4; IRF5; IRF6; IRF9 (directAnnotation). IRF3; IRF5; IRF5; IRF6 (inferredBy_Orthology).
CSF3Rtransfac_pro__M06313ZNF678 (directAnnotation).
CSF3Rtfdimers__MD00123E2F1; SOX17 (directAnnotation).
CSF3Rtaipale_tf_pairs__ETV2_SPDEF_NSCGGACGGAWATCCGSNT_CAPETV2; SPDEF (directAnnotation).
CSF3Rtransfac_pro__M12556ETV4 (directAnnotation).
CSF3Rtaipale_tf_pairs__ETV2_CEBPD_RSCGGANNTTGCGYAAN_CAP_reprCEBPD; ETV2 (directAnnotation).
CSF3Rmetacluster_131.11ZNF746 (directAnnotation).
CSF3Rtransfac_pro__M05890ZNF274 (directAnnotation).
CSF3Rtransfac_pro__M05612ZNF189 (directAnnotation).
CSF3Rmetacluster_113.5OVOL1; OVOL1; OVOL2; OVOL2; OVOL2; OVOL2 (directAnnotation). OVOL1; OVOL1; OVOL1 (inferredBy_Orthology).
CSF3Rtfdimers__MD00217LTF; MZF1 (directAnnotation).
CSF3Rhocomoco__FOXP1_HUMAN.H11MO.0.AFOXP1 (directAnnotation).
CSF3Rtransfac_pro__M06467ZNF695 (directAnnotation).
CSF3Rtransfac_pro__M06133ZNF17 (directAnnotation).
CSF3Rtransfac_pro__M04706RELA (directAnnotation).
CSF3Rcisbp__M01815CEBPE (inferredBy_Orthology).
CSF3Rjaspar__MA1954.1FOXO1 (directAnnotation).
CSF3Rmetacluster_5.1HIVEP1; HIVEP1; NFAT5; NFKB1; NFKB1; NFKB1; NFKB1; NFKB1; NFKB1; NFKB1; NFKB1; NFKB1; NFKB2; NFKB2; NFKB2; NFKB2; NFKB2; REL; REL; REL; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELB; RELB (directAnnotation). NFAT5; NFKB1; NFKB1; NFKB1; NFKB1; NFKB1; NFKB2; NFKB2; NFKB2; REL; REL; REL; REL; RELA; RELA; RELA; RELA; RELA; RELB; RELB; RELB (inferredBy_Orthology).
CSF3Rtransfac_pro__M04746E2F1 (directAnnotation).
CSF3Rmetacluster_119.2CCNT2; GATA1; GATA1; GATA1; GATA1; GATA2; GATA2; GATA2; NCOA1; TAL1; TAL1; TAL1; TAL1; ZNF823 (directAnnotation). GATA1; TAL1; TAL1; TAL1; TAL1 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
CSF3R"Eflapegrastim"

DB15001

biotech
CSF3R"FavId"

DB05249

small molecule
CSF3R"Filgrastim"

DB00099

biotech
CSF3R"Lenograstim"

DB13144

biotech
CSF3R"Lipegfilgrastim"

DB13200

biotech
CSF3R"Pegfilgrastim"

DB00019

biotech
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."