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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: CRIM1

Summary for CRIM1

Gene informationGene symbol

CRIM1

Ensembl ID

ENSG00000277354

Entrez ID

51232

Gene namecysteine rich transmembrane BMP regulator 1
SynonymsS52
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: CRIM1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells0.2825576.10e-05

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells0.324646.33e-14

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Expression of CRIM1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CRIM1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

CRIM1

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating CRIM1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CRIM1hsa-miR-5011-5p99.8321NM_016441
CRIM1hsa-miR-570-3p98.4771NM_016441
CRIM1hsa-miR-223-3p97.4465NM_016441
CRIM1hsa-miR-3529-3p97.0966NM_016441
CRIM1hsa-miR-190a-3p96.5293NM_016441
CRIM1hsa-miR-848596.4959NM_016441
CRIM1hsa-miR-548az-5p96.1787NM_016441
CRIM1hsa-miR-548t-5p96.1787NM_016441
CRIM1hsa-miR-426395.5002NM_016441
CRIM1hsa-miR-452894.8185NM_016441
CRIM1hsa-miR-374a-5p94.5566NM_016441
CRIM1hsa-miR-374b-5p94.3715NM_016441
CRIM1hsa-miR-659-3p93.0422NM_016441
CRIM1hsa-miR-3613-3p93.015NM_016441
CRIM1hsa-miR-612493.0046NM_016441
CRIM1hsa-miR-7151-3p92.8202NM_016441
CRIM1hsa-miR-227892.4545NM_016441
CRIM1hsa-miR-6504-5p92.2025NM_016441
CRIM1hsa-miR-3064-5p92.2025NM_016441
CRIM1hsa-miR-3085-3p92.2025NM_016441
CRIM1hsa-miR-182-3p92.0732NM_016441
CRIM1hsa-miR-152-5p92.0529NM_016441
CRIM1hsa-miR-3065-5p91.64NM_016441
CRIM1hsa-miR-426291.5639NM_016441
CRIM1hsa-miR-477591.2715NM_016441
CRIM1hsa-miR-4742-5p90.7804NM_016441
CRIM1hsa-miR-181d-5p90.6584NM_016441
CRIM1hsa-miR-181a-5p90.6584NM_016441
CRIM1hsa-miR-181b-5p90.6584NM_016441
CRIM1hsa-miR-181c-5p90.6584NM_016441
CRIM1hsa-miR-6875-3p89.9175NM_016441
CRIM1hsa-miR-6501-3p89.6015NM_016441
CRIM1hsa-miR-6716-5p89.0929NM_016441
CRIM1hsa-miR-7159-5p88.4693NM_016441
CRIM1hsa-miR-6715b-3p88.3341NM_016441
CRIM1hsa-miR-6727-3p88.3319NM_016441
CRIM1hsa-miR-302f87.5599NM_016441
CRIM1hsa-miR-4666a-3p86.738NM_016441
CRIM1hsa-miR-218-1-3p85.6288NM_016441
CRIM1hsa-miR-4722-3p85.6099NM_016441
CRIM1hsa-miR-446885.5727NM_016441
CRIM1hsa-miR-4659b-3p85.3622NM_016441
CRIM1hsa-miR-4659a-3p85.3622NM_016441
CRIM1hsa-miR-511-3p85.2039NM_016441
CRIM1hsa-miR-200b-5p84.4938NM_016441
CRIM1hsa-miR-200a-5p84.4938NM_016441
CRIM1hsa-miR-9-5p84.1745NM_016441
CRIM1hsa-miR-3160-3p82.8534NM_016441
CRIM1hsa-miR-182582.2489NM_016441
CRIM1hsa-miR-5003-5p82.2371NM_016441
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Motifs and transcription factors (TFs) regulating CRIM1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CRIM1transfac_pro__M05993ZNF711 (directAnnotation).
CRIM1hocomoco__FOXP1_HUMAN.H11MO.0.AFOXP1 (directAnnotation).
CRIM1metacluster_22.12NFE2; NFE2L1 (directAnnotation).
CRIM1metacluster_22.25NFE2L2 (directAnnotation).
CRIM1transfac_pro__M06117ZNF23 (directAnnotation).
CRIM1jaspar__MA0079.5SP1 (directAnnotation).
CRIM1kznf__KLF1_Barrera2016.2_PBMKLF1 (directAnnotation).
CRIM1taipale_cyt_meth__ZNF460_NAACGCCCCCCGN_eDBD_reprZNF460 (directAnnotation).
CRIM1transfac_pro__M01253CNOT3 (directAnnotation).
CRIM1hdpi__NFIXNFIX (directAnnotation).
CRIM1transfac_pro__M04817ZBTB33 (directAnnotation).
CRIM1transfac_pro__M05712ZNF134 (directAnnotation).
CRIM1cisbp__M07938E2F1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."