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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: COL5A2

Summary for COL5A2

Gene informationGene symbol

COL5A2

Ensembl ID

ENSG00000204262

Entrez ID

1290

Gene namecollagen type V alpha 2 chain
SynonymsNA
Gene typeprotein_coding
UniProtAcc

P05997


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Dataset with differentially expressed gene: COL5A2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells-2.27298.35e-07

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells0.3028336.43e-18

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells0.2936341.34e-12

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Expression of COL5A2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to COL5A2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating COL5A2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
COL5A2hsa-miR-365899.2988NM_000393
COL5A2hsa-miR-323a-5p98.5868NM_000393
COL5A2hsa-miR-568297.8546NM_000393
COL5A2hsa-miR-29a-3p96.8371NM_000393
COL5A2hsa-miR-29c-3p96.8371NM_000393
COL5A2hsa-miR-29b-3p96.8371NM_000393
COL5A2hsa-miR-5007-5p95.4533NM_000393
COL5A2hsa-miR-1251-3p93.9587NM_000393
COL5A2hsa-miR-6820-3p93.0599NM_000393
COL5A2hsa-miR-316493.0599NM_000393
COL5A2hsa-miR-224-3p92.5063NM_000393
COL5A2hsa-miR-390791.7667NM_000393
COL5A2hsa-miR-3678-3p91.4385NM_000393
COL5A2hsa-miR-570-3p91.1093NM_000393
COL5A2hsa-miR-522-3p90.5852NM_000393
COL5A2hsa-miR-888-5p89.8626NM_000393
COL5A2hsa-miR-430789.5556NM_000393
COL5A2hsa-miR-4477b89.4589NM_000393
COL5A2hsa-miR-6871-3p89.389NM_000393
COL5A2hsa-miR-6824-5p88.9636NM_000393
COL5A2hsa-miR-4482-3p88.9611NM_000393
COL5A2hsa-miR-6783-5p88.9143NM_000393
COL5A2hsa-miR-7856-5p88.3409NM_000393
COL5A2hsa-miR-6759-5p87.712NM_000393
COL5A2hsa-miR-5582-3p87.5457NM_000393
COL5A2hsa-miR-4756-3p87.2312NM_000393
COL5A2hsa-miR-6505-5p85.6367NM_000393
COL5A2hsa-miR-148a-5p84.8921NM_000393
COL5A2hsa-miR-450084.2373NM_000393
COL5A2hsa-miR-4755-3p84.1601NM_000393
COL5A2hsa-miR-447082.8614NM_000393
COL5A2hsa-miR-569682.6572NM_000393
COL5A2hsa-miR-499a-5p82.2562NM_000393
COL5A2hsa-miR-1468-3p82.169NM_000393
COL5A2hsa-miR-153-5p81.8804NM_000393
COL5A2hsa-miR-568081.478NM_000393
COL5A2hsa-miR-335-5p81.15NM_000393
COL5A2hsa-miR-397380.9893NM_000393
COL5A2hsa-miR-509380.9387NM_000393
COL5A2hsa-miR-98-5p80.445NM_000393
COL5A2hsa-let-7e-5p80.445NM_000393
COL5A2hsa-let-7g-5p80.445NM_000393
COL5A2hsa-let-7i-5p80.445NM_000393
COL5A2hsa-let-7c-5p80.445NM_000393
COL5A2hsa-let-7a-5p80.445NM_000393
COL5A2hsa-let-7b-5p80.445NM_000393
COL5A2hsa-let-7f-5p80.445NM_000393
COL5A2hsa-miR-6504-3p80.2645NM_000393
COL5A2hsa-miR-10399-5p80.2645NM_000393
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Motifs and transcription factors (TFs) regulating COL5A2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
COL5A2transfac_pro__M05791ZNF517 (directAnnotation).
COL5A2metacluster_153.4SOX12; SOX14; SRY (directAnnotation). SOX5 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."