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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: CNOT6L

Summary for CNOT6L

Gene informationGene symbol

CNOT6L

Ensembl ID

ENSG00000138767

Entrez ID

246175

Gene nameCCR4-NOT transcription complex subunit 6 like
SynonymsCcr4b|DKFZp434K098
Gene typeprotein_coding
UniProtAcc

Q96LI5


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Dataset with differentially expressed gene: CNOT6L

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD4+ T cells0.2863463.38e-28

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNACD8+ T cells0.3006695.61e-03

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNACD4+ T cells0.3653861.19e-04

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD4+ T cells-0.3239722.56e-33

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postCD4+ T cells0.540367.98e-19

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD4+ T cells-0.3974740.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreCD8+ T cells0.2925921.90e-04

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreCD4+ T cells0.314432.00e-05

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepostCD4+ T cells-0.2708286.25e-03

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Expression of CNOT6L in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CNOT6L

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating CNOT6L

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CNOT6Lhsa-miR-5011-5p99.9954NM_001286790
CNOT6Lhsa-miR-190a-3p99.9786NM_001286790
CNOT6Lhsa-miR-4666a-3p99.963NM_001286790
CNOT6Lhsa-miR-314899.9474NM_001286790
CNOT6Lhsa-miR-3613-3p99.3866NM_001286790
CNOT6Lhsa-let-7b-3p99.3306NM_001286790
CNOT6Lhsa-let-7a-3p99.3306NM_001286790
CNOT6Lhsa-let-7f-1-3p99.3306NM_001286790
CNOT6Lhsa-miR-98-3p99.3306NM_001286790
CNOT6Lhsa-miR-302c-5p99.1353NM_001286790
CNOT6Lhsa-miR-5692a99.099NM_001286790
CNOT6Lhsa-miR-366298.718NM_001286790
CNOT6Lhsa-miR-428298.6843NM_001286790
CNOT6Lhsa-miR-3688-3p98.5023NM_001286790
CNOT6Lhsa-miR-5197-5p98.3645NM_001286790
CNOT6Lhsa-miR-1213697.8663NM_001286790
CNOT6Lhsa-miR-23b-3p97.7995NM_001286790
CNOT6Lhsa-miR-23c97.7995NM_001286790
CNOT6Lhsa-miR-23a-3p97.7995NM_001286790
CNOT6Lhsa-miR-520d-5p97.7981NM_001286790
CNOT6Lhsa-miR-524-5p97.7981NM_001286790
CNOT6Lhsa-miR-548ac97.6143NM_001286790
CNOT6Lhsa-miR-548z97.6143NM_001286790
CNOT6Lhsa-miR-548h-3p97.6143NM_001286790
CNOT6Lhsa-miR-30097.5158NM_001286790
CNOT6Lhsa-miR-381-3p97.5158NM_001286790
CNOT6Lhsa-miR-392097.269NM_001286790
CNOT6Lhsa-miR-548bb-3p97.2452NM_001286790
CNOT6Lhsa-miR-548d-3p97.2452NM_001286790
CNOT6Lhsa-miR-138-5p97.1491NM_001286790
CNOT6Lhsa-miR-6768-5p96.804NM_001286790
CNOT6Lhsa-miR-371b-5p96.6063NM_001286790
CNOT6Lhsa-miR-616-5p96.6063NM_001286790
CNOT6Lhsa-miR-373-5p96.6063NM_001286790
CNOT6Lhsa-miR-314396.5925NM_001286790
CNOT6Lhsa-miR-374c-5p96.5631NM_001286790
CNOT6Lhsa-miR-655-3p96.5631NM_001286790
CNOT6Lhsa-miR-64696.4383NM_001286790
CNOT6Lhsa-miR-4789-3p96.3731NM_001286790
CNOT6Lhsa-miR-9-5p96.3013NM_001286790
CNOT6Lhsa-miR-338-5p96.2375NM_001286790
CNOT6Lhsa-miR-16-5p95.6165NM_001286790
CNOT6Lhsa-miR-195-5p95.6165NM_001286790
CNOT6Lhsa-miR-15b-5p95.6165NM_001286790
CNOT6Lhsa-miR-15a-5p95.6165NM_001286790
CNOT6Lhsa-miR-4694-3p95.5545NM_001286790
CNOT6Lhsa-miR-513a-3p95.4243NM_001286790
CNOT6Lhsa-miR-513c-3p95.4243NM_001286790
CNOT6Lhsa-miR-424-5p95.2452NM_001286790
CNOT6Lhsa-miR-497-5p95.2452NM_001286790
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Motifs and transcription factors (TFs) regulating CNOT6L

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CNOT6Ltfdimers__MD00546HOXC8; NFE2L1 (directAnnotation).
CNOT6Ltransfac_pro__M06363ZNF730 (directAnnotation).
CNOT6Lmetacluster_9.47PAX7 (inferredBy_Orthology).
CNOT6Ltransfac_pro__M01783SP2 (directAnnotation).
CNOT6Ltransfac_pro__M02848EGR1 (inferredBy_Orthology).
CNOT6Ltaipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
CNOT6Ltransfac_pro__M07475TBX5 (inferredBy_Orthology).
CNOT6Lcisbp__M00775ZBTB1 (inferredBy_Orthology).
CNOT6Lmetacluster_84.2RARA (directAnnotation).
CNOT6Ltaipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
CNOT6Lmetacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
CNOT6Ljaspar__MA1650.1ZBTB14 (directAnnotation).
CNOT6Ltransfac_pro__M02090E2F4 (directAnnotation).
CNOT6Ltransfac_pro__M08005TCFL5 (inferredBy_Orthology).
CNOT6Lmetacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
CNOT6Ltaipale_cyt_meth__ZBTB37_NYACCGCRNNYACCGYR_eDBD_meth_reprZBTB37 (directAnnotation).
CNOT6Lmetacluster_126.2ZBTB4; ZBTB4 (directAnnotation).
CNOT6Ltaipale_tf_pairs__TFAP2C_HES7_NNCRCGYGNNNNNNNSCCNNNGGS_CAP_reprHES7; TFAP2C (directAnnotation).
CNOT6Lmetacluster_66.4ARNT2; NR0B1; NR0B1; ZSCAN5A; ZSCAN5A (directAnnotation). ARNT2 (inferredBy_Orthology).
CNOT6Ltaipale_tf_pairs__TFAP2C_E2F8_NNTCCCGCNNNCCNNNGGC_CAP_reprE2F8; TFAP2C (directAnnotation).
CNOT6Ltaipale_tf_pairs__E2F3_TBX21_NGGTGTGNNGGCGCSN_CAP_reprE2F3; TBX21 (directAnnotation).
CNOT6Lkznf__ZNF267_Imbeault2017_OM_RCADEZNF267 (directAnnotation).
CNOT6Lhdpi__HES5HES5 (directAnnotation).
CNOT6Lcisbp__M01733CCDC169-SOHLH2; SOHLH2 (inferredBy_Orthology).
CNOT6Ljaspar__MA1522.1MAZ (directAnnotation).
CNOT6Lkznf__EGR2_Barrera2016.1_PBMEGR2 (directAnnotation).
CNOT6Ltaipale_cyt_meth__GCM1_RTGCGGGTN_eDBDGCM1 (directAnnotation).
CNOT6Ldbtfbs__ZNF407_representative_N1ZNF407 (directAnnotation).
CNOT6Lmetacluster_19.9AHR; AHR; SREBF1; SREBF1; SREBF2; SREBF2 (directAnnotation). SREBF1 (inferredBy_Orthology).
CNOT6Lmetacluster_198.2AHR; AHR; ARNT; BHLHE40; MAX; MYC; ZNF780A (directAnnotation). MTF1 (inferredBy_Orthology).
CNOT6Ltaipale_tf_pairs__GCM2_HES7_RTRNKGGTNNNGCACGYGNN_CAP_reprGCM2; HES7 (directAnnotation).
CNOT6Lmetacluster_154.2PAX1; PAX2; PAX2; PAX2; PAX2; PAX4; PAX4; PAX4; PAX4; PAX4; PAX5; PAX5; PAX5; PAX5; PAX5; PAX5; PAX5; PAX5; PAX5; PAX5; PAX5; PAX5; PAX6; PAX6; PAX6; PAX6; PAX6; PAX6; PAX6; PAX6; PAX8; PAX8; PAX9 (directAnnotation). PAX1; PAX1; PAX1; PAX5; PAX6; PAX6 (inferredBy_Orthology).
CNOT6Lhdpi__NRLNRL (directAnnotation).
CNOT6Lmetacluster_37.4FOXN2 (directAnnotation).
CNOT6Ltaipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
CNOT6Ltransfac_public__M00446SPZ1 (directAnnotation).
CNOT6Ldbtfbs__ZNF770_HEK293_ENCSR242BGR_merged_N1ZNF770 (directAnnotation).
CNOT6Lhdpi__OTUD4OTUD4 (directAnnotation).
CNOT6Ltaipale_tf_pairs__E2F3_TBX21_NGGTGTGNNNGGCGCSN_CAP_reprE2F3; TBX21 (directAnnotation).
CNOT6Lkznf__ZBTB26_Schmitges2016_ChIP-seqZBTB26 (directAnnotation).
CNOT6Lmetacluster_61.1DEAF1; DEAF1 (directAnnotation).
CNOT6Lswissregulon__hs__EPAS1EPAS1 (directAnnotation).
CNOT6Lmetacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
CNOT6Ltransfac_pro__M02898SMAD3 (directAnnotation).
CNOT6Ltransfac_pro__M04866HDAC2 (directAnnotation).
CNOT6Lhocomoco__ZEP2_HUMAN.H11MO.0.DHIVEP2 (directAnnotation).
CNOT6Ltransfac_public__M00373PAX4 (directAnnotation).
CNOT6Lhdpi__HTATIP2HTATIP2 (directAnnotation).
CNOT6Ltaipale_tf_pairs__ETV5_HES7_CCGGAANNNNNNCACGTG_CAPETV5; HES7 (directAnnotation).
CNOT6Lcisbp__M07938E2F1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."