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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: CMTR2

Summary for CMTR2

Gene informationGene symbol

CMTR2

Ensembl ID

ENSG00000180917

Entrez ID

55783

Gene namecap methyltransferase 2
SynonymsAFT|FLJ11171|FTSJD1|MTr2
Gene typeprotein_coding
UniProtAcc

Q8IYT2


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Dataset with differentially expressed gene: CMTR2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.2585410.00e+00

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Expression of CMTR2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CMTR2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating CMTR2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CMTR2hsa-miR-106b-5p96.4988NM_001099642
CMTR2hsa-miR-20a-5p96.4988NM_001099642
CMTR2hsa-miR-6792-5p96.1965NM_018348
CMTR2hsa-miR-93-5p95.5999NM_001099642
CMTR2hsa-miR-17-5p95.5999NM_001099642
CMTR2hsa-miR-519d-3p95.5999NM_001099642
CMTR2hsa-miR-20b-5p95.5999NM_001099642
CMTR2hsa-miR-526b-3p95.5999NM_001099642
CMTR2hsa-miR-106a-5p95.5999NM_001099642
CMTR2hsa-miR-3180-5p92.2829NM_018348
CMTR2hsa-miR-3529-3p89.8929NM_018348
CMTR2hsa-miR-5189-5p88.4832NM_018348
CMTR2hsa-miR-1285-3p88.4832NM_018348
CMTR2hsa-miR-61288.4832NM_018348
CMTR2hsa-miR-686088.4832NM_018348
CMTR2hsa-miR-3187-5p88.4832NM_018348
CMTR2hsa-miR-345-3p88.0487NM_018348
CMTR2hsa-miR-302e86.4961NM_001099642
CMTR2hsa-miR-9-5p85.6175NM_018348
CMTR2hsa-miR-520e-5p85.5753NM_018348
CMTR2hsa-miR-4711-5p84.997NM_018348
CMTR2hsa-miR-119384.7978NM_018348
CMTR2hsa-miR-302b-3p83.9978NM_001099642
CMTR2hsa-miR-520a-3p83.9978NM_001099642
CMTR2hsa-miR-302c-3p83.9978NM_001099642
CMTR2hsa-miR-520e-3p83.9978NM_001099642
CMTR2hsa-miR-373-3p83.9978NM_001099642
CMTR2hsa-miR-302d-3p83.9978NM_001099642
CMTR2hsa-miR-372-3p83.9978NM_001099642
CMTR2hsa-miR-520c-3p83.9978NM_001099642
CMTR2hsa-miR-302a-3p83.9978NM_001099642
CMTR2hsa-miR-520d-3p83.9978NM_001099642
CMTR2hsa-miR-520b-3p83.9978NM_001099642
CMTR2hsa-miR-1912-5p82.1972NM_018348
CMTR2hsa-miR-1212382.1226NM_001099642
CMTR2hsa-miR-806380.851NM_018348
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Motifs and transcription factors (TFs) regulating CMTR2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CMTR2taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
CMTR2metacluster_131.7EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; EGR3; EGR3; EGR3; EGR3; EGR4; EGR4; WT1 (directAnnotation). EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; WT1; ZBTB43; ZBTB43; ZBTB43; ZBTB43; ZBTB5; ZBTB5; ZBTB5; ZBTB5; ZBTB7A; ZBTB7A; ZBTB7A; ZBTB7A; ZNF367; ZNF367; ZNF367; ZNF367; ZNF740; ZNF740; ZNF740; ZNF740 (inferredBy_Orthology).
CMTR2taipale_cyt_meth__ZNF281_NCCCCTCCCCCN_eDBD_methZNF281 (directAnnotation).
CMTR2metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
CMTR2metacluster_7.13ZFX (directAnnotation).
CMTR2metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
CMTR2transfac_pro__M01175ZBTB7B (directAnnotation).
CMTR2metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
CMTR2metacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
CMTR2transfac_pro__M01303SP1 (directAnnotation).
CMTR2metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
CMTR2transfac_pro__M02090E2F4 (directAnnotation).
CMTR2transfac_pro__M01714KLF15 (directAnnotation).
CMTR2metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
CMTR2transfac_pro__M02089E2F3 (directAnnotation).
CMTR2metacluster_3.14WT1; WT1 (directAnnotation).
CMTR2metacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
CMTR2homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
CMTR2transfac_pro__M02281SP1 (directAnnotation).
CMTR2taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
CMTR2transfac_pro__M02898SMAD3 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."