DRMref Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Datasets with differential expression of this gene

leaf

Expression of this gene in the resistant group across all datasets and cell types

leaf

Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

leaf

Known drug resistance mechanisms of this gene (This gene does not contain this module)

leaf

MicroRNAs (miRNAs) regulating this gene

leaf

Motifs and transcription factors (TFs) regulating this gene

leaf

Acts as a transcription factor (This gene does not contain this module)

leaf

Acts as a drug target< (This gene does not contain this module)

Gene: CKAP2

Summary for CKAP2

Gene informationGene symbol

CKAP2

Ensembl ID

ENSG00000136108

Entrez ID

26586

Gene namecytoskeleton associated protein 2
SynonymsFLJ10749|LB1|se20-10|TMAP
Gene typeprotein_coding
UniProtAcc

NA


Top

Dataset with differentially expressed gene: CKAP2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.414460.00e+00

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.6533420.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes-0.5724240.00e+00

Top

Expression of CKAP2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

Top

Significant ligand-receptor pairs related to CKAP2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

Top

MicroRNAs (miRNA) regulating CKAP2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CKAP2hsa-miR-360999.5177NM_001098525
CKAP2hsa-miR-548ah-5p99.5177NM_001098525
CKAP2hsa-miR-4738-3p97.6723NM_001098525
CKAP2hsa-miR-467294.1146NM_001098525
CKAP2hsa-miR-607493.6468NM_001286687
CKAP2hsa-miR-568992.1993NM_001286687
CKAP2hsa-miR-514b-5p91.6645NM_001286687
CKAP2hsa-miR-513c-5p91.6645NM_001286687
CKAP2hsa-miR-561-5p89.7464NM_001098525
CKAP2hsa-miR-5590-5p89.566NM_001098525
CKAP2hsa-miR-548av-3p88.3855NM_001098525
CKAP2hsa-miR-3121-3p87.7619NM_001098525
CKAP2hsa-miR-392686.8293NM_001098525
CKAP2hsa-miR-497-3p86.1399NM_001098525
CKAP2hsa-miR-64985.6825NM_001098525
CKAP2hsa-miR-548aj-3p85.2392NM_001098525
CKAP2hsa-miR-548x-3p85.2392NM_001098525
CKAP2hsa-miR-430684.5294NM_001098525
CKAP2hsa-miR-561-3p84.4341NM_001098525
CKAP2hsa-miR-6509-5p83.0495NM_001098525
CKAP2hsa-miR-548ae-3p82.6456NM_001098525
CKAP2hsa-miR-548am-3p82.6456NM_001098525
CKAP2hsa-miR-548ah-3p82.6456NM_001098525
CKAP2hsa-miR-548aq-3p82.6456NM_001098525
CKAP2hsa-miR-548j-3p82.6456NM_001098525
CKAP2hsa-miR-4753-5p81.8189NM_001098525
CKAP2hsa-miR-5011-5p80.9997NM_001098525
Page: 1

Top

Motifs and transcription factors (TFs) regulating CKAP2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CKAP2metacluster_174.3MBD2; NFYA; NFYB; NFYC; PBX3 (directAnnotation).
CKAP2metacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
CKAP2metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
CKAP2taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
CKAP2hocomoco__TYY2_HUMAN.H11MO.0.DYY2 (directAnnotation).
CKAP2metacluster_141.4GLIS2 (directAnnotation).
CKAP2metacluster_174.6NFYA; NFYB; NFYB; NFYC (directAnnotation).
CKAP2transfac_pro__M07483CXXC1 (directAnnotation).
Page: 1

Top

Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

Top

Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."