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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: CIT

Summary for CIT

Gene informationGene symbol

CIT

Ensembl ID

ENSG00000122966

Entrez ID

11113

Gene namecitron rho-interacting serine/threonine kinase
SynonymsCITK|CRIK|KIAA0949|STK21
Gene typeprotein_coding
UniProtAcc

O14578


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Dataset with differentially expressed gene: CIT

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells-1.686686.52e-08

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.3173469.25e-44

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Expression of CIT in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CIT

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating CIT

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CIThsa-miR-548an98.1628NM_001206999
CIThsa-miR-3074-5p97.3016NM_001206999
CIThsa-miR-7152-5p95.7243NM_001206999
CIThsa-miR-561-3p95.5146NM_001206999
CIThsa-miR-4762-5p94.2937NM_001206999
CIThsa-miR-57893.7309NM_001206999
CIThsa-miR-6778-5p93.303NM_001206999
CIThsa-miR-1233-5p93.303NM_001206999
CIThsa-miR-3922-5p93.0907NM_001206999
CIThsa-miR-431889.9532NM_001206999
CIThsa-miR-29b-2-5p88.6571NM_001206999
CIThsa-miR-1207-5p87.7767NM_001206999
CIThsa-miR-125787.4159NM_001206999
CIThsa-miR-4800-5p87.1977NM_001206999
CIThsa-miR-6799-5p87.0812NM_001206999
CIThsa-miR-6858-5p86.7286NM_001206999
CIThsa-miR-468986.7286NM_001206999
CIThsa-miR-6835-3p86.6286NM_001206999
CIThsa-miR-545-3p86.0804NM_001206999
CIThsa-miR-4763-3p85.8904NM_001206999
CIThsa-miR-80285.8596NM_001206999
CIThsa-miR-4529-5p85.3813NM_001206999
CIThsa-miR-5006-5p85.3261NM_001206999
CIThsa-miR-61084.407NM_001206999
CIThsa-miR-392683.4562NM_001206999
CIThsa-miR-429183.2154NM_001206999
CIThsa-miR-442783.1407NM_001206999
CIThsa-miR-519a-3p83.1343NM_001206999
CIThsa-miR-519b-3p83.1343NM_001206999
CIThsa-miR-519c-3p83.1343NM_001206999
CIThsa-miR-130b-3p82.8161NM_001206999
CIThsa-miR-366682.8161NM_001206999
CIThsa-miR-64382.4203NM_001206999
CIThsa-miR-3158-5p82.2928NM_001206999
CIThsa-miR-449982.2268NM_001206999
CIThsa-miR-142-5p82.1089NM_001206999
CIThsa-miR-5590-3p82.1089NM_001206999
CIThsa-miR-3059-5p81.8419NM_001206999
CIThsa-miR-3130-3p81.3869NM_001206999
CIThsa-miR-4728-5p81.1655NM_001206999
CIThsa-miR-6785-5p81.1655NM_001206999
CIThsa-miR-443881.0828NM_001206999
CIThsa-miR-9851-5p80.8779NM_001206999
CIThsa-miR-6879-3p80.5909NM_001206999
CIThsa-miR-519080.5204NM_001206999
CIThsa-miR-7111-3p80.2159NM_001206999
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Motifs and transcription factors (TFs) regulating CIT

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CITmetacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
CITtransfac_pro__M05578ZFP92 (inferredBy_Orthology).
CITmetacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
CITjaspar__MA0079.5SP1 (directAnnotation).
CITtaipale_tf_pairs__GCM1_ETV1_RTRNNGGCGGAAGTN_CAPETV1; GCM1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
CIT"Fostamatinib"

DB12010

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."