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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: CHST12

Summary for CHST12

Gene informationGene symbol

CHST12

Ensembl ID

ENSG00000136213

Entrez ID

55501

Gene namecarbohydrate sulfotransferase 12
SynonymsC4S-2|C4ST2
Gene typeprotein_coding
UniProtAcc

Q9NRB3


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Dataset with differentially expressed gene: CHST12

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells-0.42930.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostPlasma cells0.2714456.10e-03

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD8+ T cells-0.3160550.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells0.501470.00e+00

GSE111014

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaChronic lymphocytic leukemia (CLL)Targeted therapyibrutinibpreCD8+ T cells-0.2803853.08e-04

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepreMalignant cells0.2986590.00e+00

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Expression of CHST12 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CHST12

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating CHST12

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CHST12hsa-miR-101-3p87.4506NM_001243794
CHST12hsa-miR-6779-3p80.6202NM_001243794
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Motifs and transcription factors (TFs) regulating CHST12

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CHST12transfac_public__M00039CREB1 (directAnnotation).
CHST12jaspar__MA0039.4KLF4 (directAnnotation).
CHST12taipale_cyt_meth__KLF3_NRCCGCAGCCCN_FL_meth_reprKLF3 (directAnnotation).
CHST12transfac_pro__M04595SALL2 (directAnnotation).
CHST12taipale_tf_pairs__HOXB2_ELK3_RSCGGAAGTMRTTA_CAPELK3; HOXB2 (directAnnotation).
CHST12taipale_tf_pairs__ETV2_DRGX_RSCGGAWRYATTA_CAP_reprDRGX; ETV2 (directAnnotation).
CHST12jaspar__MA1957.1ELK1 (directAnnotation).
CHST12taipale_tf_pairs__ELK1_FOXI1_WGTTKMCGGAWRTN_CAPELK1; FOXI1 (directAnnotation).
CHST12taipale_tf_pairs__HOXD12_ELK3_NTTTAYNNCCGGAARNN_CAP_reprELK3; HOXD12 (directAnnotation).
CHST12metacluster_167.7IRF8 (inferredBy_Orthology).
CHST12metacluster_141.4GLIS2 (directAnnotation).
CHST12metacluster_141.2E2F2; E2F3 (directAnnotation).
CHST12transfac_pro__M05402BCL6B (directAnnotation).
CHST12metacluster_111.6GMEB1; GMEB2 (directAnnotation).
CHST12tfdimers__MD00439ATF1; HOXA13 (directAnnotation).
CHST12transfac_pro__M06241ZNF345 (directAnnotation).
CHST12transfac_pro__M06073ZNF749 (directAnnotation).
CHST12taipale__YY2_DBD_NNCCGCCATNW_reprYY2 (directAnnotation).
CHST12transfac_public__M00040ATF2 (directAnnotation).
CHST12transfac_pro__M06724ZNF331 (directAnnotation).
CHST12transfac_pro__M05543ZSCAN12 (inferredBy_Orthology).
CHST12kznf__ZNF425_Imbeault2017_RP_RCADEZNF425 (directAnnotation).
CHST12swissregulon__hs__OVOL1OVOL1 (directAnnotation).
CHST12taipale_cyt_meth__CREB1_NRTGACGTN_eDBD_reprCREB1 (directAnnotation).
CHST12taipale_tf_pairs__FOXO1_HOXB13_GWMAACAYMRTAAA_CAPFOXO1; HOXB13 (directAnnotation).
CHST12jaspar__MA1944.1ETV5 (directAnnotation).
CHST12jaspar__MA1563.2SOX18 (directAnnotation).
CHST12transfac_pro__M05566ZSCAN25 (directAnnotation).
CHST12metacluster_23.10FOXO4 (inferredBy_Orthology).
CHST12taipale_tf_pairs__TEAD4_HOXA2_RCATTCNNNNNNCATTA_CAPHOXA2; TEAD4 (directAnnotation).
CHST12metacluster_2.8IRF4; IRF5; IRF6; IRF9 (directAnnotation). IRF3; IRF5; IRF5; IRF6 (inferredBy_Orthology).
CHST12jaspar__MA1509.1IRF6 (directAnnotation).
CHST12tfdimers__MD00125ARID3A; FOS; FOSB; FOSL1; FOSL2; JUN; JUNB; JUND (directAnnotation).
CHST12tfdimers__MD00071CEBPA; CEBPB; CEBPD; CEBPE; CEBPG; SOX10 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."