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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: CHMP5

Summary for CHMP5

Gene informationGene symbol

CHMP5

Ensembl ID

ENSG00000086065

Entrez ID

51510

Gene namecharged multivesicular body protein 5
SynonymsC9orf83|CGI-34|HSPC177|SNF7DC2|Vps60
Gene typeprotein_coding
UniProtAcc

Q9NZZ3


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Dataset with differentially expressed gene: CHMP5

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells-0.4331580.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells0.347050.00e+00

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Expression of CHMP5 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CHMP5

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating CHMP5

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CHMP5hsa-miR-6882-5p98.969NM_016410
CHMP5hsa-miR-126-5p97.034NM_016410
CHMP5hsa-miR-314896.3561NM_016410
CHMP5hsa-miR-4795-3p92.7956NM_016410
CHMP5hsa-miR-873-3p92.4755NM_016410
CHMP5hsa-miR-5187-3p92.3982NM_016410
CHMP5hsa-miR-15b-3p92.1639NM_016410
CHMP5hsa-miR-397891.8771NM_016410
CHMP5hsa-miR-570-3p91.6289NM_001195536
CHMP5hsa-miR-5588-3p90.6286NM_016410
CHMP5hsa-miR-806890.4773NM_016410
CHMP5hsa-miR-224-5p90.1954NM_016410
CHMP5hsa-miR-6510-5p89.8088NM_001195536
CHMP5hsa-miR-3124-3p89.5968NM_016410
CHMP5hsa-miR-1212788.6949NM_016410
CHMP5hsa-miR-510-3p88.3782NM_001195536
CHMP5hsa-miR-3688-3p88.3157NM_016410
CHMP5hsa-miR-513b-5p86.5401NM_001195536
CHMP5hsa-miR-447886.0201NM_016410
CHMP5hsa-miR-29b-2-5p85.6125NM_016410
CHMP5hsa-miR-6721-5p83.9277NM_016410
CHMP5hsa-miR-323a-3p82.7064NM_016410
CHMP5hsa-miR-1211580.0981NM_016410
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Motifs and transcription factors (TFs) regulating CHMP5

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CHMP5taipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
CHMP5jaspar__MA1483.2ELF2 (directAnnotation).
CHMP5hdpi__FLI1FLI1 (directAnnotation).
CHMP5transfac_pro__M04826EP300 (directAnnotation).
CHMP5taipale_tf_pairs__ELF2_NATGCGGAAGTR_HTELF2 (directAnnotation).
CHMP5metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
CHMP5metacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
CHMP5swissregulon__hs__ELF2ELF2 (directAnnotation).
CHMP5taipale_tf_pairs__ELK1_FOXI1_RSCGGATGTKKN_CAPELK1; FOXI1 (directAnnotation).
CHMP5swissregulon__hs__ETV6ETV6 (directAnnotation).
CHMP5metacluster_166.2ELK4; ETS1; ETS1; ETV1; ETV3; ETV4; ETV5; ETV7 (directAnnotation). GABPA (inferredBy_Orthology).
CHMP5taipale_tf_pairs__ETV2_FOXO6_RCCGGATGTTKWN_CAPETV2; FOXO6 (directAnnotation).
CHMP5metacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
CHMP5taipale_tf_pairs__ETV5_FOXI1_RSCGGATGTTGN_CAPETV5; FOXI1 (directAnnotation).
CHMP5taipale_tf_pairs__ERF_FOXI1_RSCGGATGTTKWN_CAP_reprERF; FOXI1 (directAnnotation).
CHMP5taipale_tf_pairs__FOXO1_ELK3_RCCGGAWGTKKW_CAPELK3; FOXO1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."