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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: CHFR

Summary for CHFR

Gene informationGene symbol

CHFR

Ensembl ID

ENSG00000072609

Entrez ID

55743

Gene namecheckpoint with forkhead and ring finger domains
SynonymsFLJ10796|RNF196
Gene typeprotein_coding
UniProtAcc

Q96EP1


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Dataset with differentially expressed gene: CHFR

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepreB cells-0.4776638.31e-04

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Expression of CHFR in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CHFR

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating CHFR

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CHFRhsa-miR-26a-5p94.5533NM_001161344
CHFRhsa-miR-129794.5533NM_001161344
CHFRhsa-miR-26b-5p94.1074NM_001161344
CHFRhsa-miR-446594.0221NM_001161344
CHFRhsa-miR-3065-5p93.9172NM_001161346
CHFRhsa-miR-335-5p93.0121NM_001161344
CHFRhsa-miR-432492.9838NM_001161344
CHFRhsa-miR-472992.501NM_001161344
CHFRhsa-miR-120092.0307NM_001161344
CHFRhsa-miR-7850-5p91.4598NM_001161346
CHFRhsa-miR-57790.8511NM_001161346
CHFRhsa-miR-7159-5p89.6216NM_001161346
CHFRhsa-miR-498-5p87.8304NM_001161344
CHFRhsa-miR-548p87.5551NM_001161346
CHFRhsa-miR-125387.2712NM_001161344
CHFRhsa-miR-548v87.2376NM_001161346
CHFRhsa-miR-378a-5p85.6243NM_001161344
CHFRhsa-miR-469685.4848NM_001161344
CHFRhsa-miR-548f-5p85.1502NM_001161346
CHFRhsa-miR-548aj-5p85.1502NM_001161346
CHFRhsa-miR-548x-5p85.1502NM_001161346
CHFRhsa-miR-548g-5p85.1502NM_001161346
CHFRhsa-miR-211385.1306NM_001161344
CHFRhsa-miR-758-3p84.7275NM_001161346
CHFRhsa-miR-569784.5679NM_001161344
CHFRhsa-miR-593-3p83.3937NM_001161346
CHFRhsa-miR-498-3p83.2287NM_001161344
CHFRhsa-miR-4742-3p82.2224NM_001161346
CHFRhsa-miR-544b81.5167NM_001161344
CHFRhsa-miR-488-5p81.3555NM_001161344
CHFRhsa-miR-451b81.3302NM_001161344
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Motifs and transcription factors (TFs) regulating CHFR

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CHFRtaipale_tf_pairs__FOXJ2_ELF1_RMAGAAAACCGAANN_CAP_reprELF1; FOXJ2 (directAnnotation).
CHFRmetacluster_72.10ZNF697 (directAnnotation).
CHFRtaipale_tf_pairs__FOXO1_ELF1_NNGAAAACCGAANM_CAPELF1; FOXO1 (directAnnotation).
CHFRtransfac_pro__M06277ZNF404 (directAnnotation).
Page: 1

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."