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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: CFAP97

Summary for CFAP97

Gene informationGene symbol

CFAP97

Ensembl ID

ENSG00000164323

Entrez ID

57587

Gene namecilia and flagella associated protein 97
SynonymsDKFZp434F1728|hmw|KIAA1430
Gene typeprotein_coding
UniProtAcc

Q9P2B7


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Dataset with differentially expressed gene: CFAP97

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.5707082.77e-34

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-0.5526510.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells-0.3887660.00e+00

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Expression of CFAP97 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CFAP97

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating CFAP97

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CFAP97hsa-miR-5011-5p100NM_020827
CFAP97hsa-miR-190a-3p99.9973NM_020827
CFAP97hsa-miR-426398.4659NM_020827
CFAP97hsa-miR-316394.9518NM_020827
CFAP97hsa-miR-570-3p93.9121NM_020827
CFAP97hsa-miR-468293.6679NM_001292033
CFAP97hsa-miR-664a-3p92.2985NM_020827
CFAP97hsa-miR-203a-3p91.377NM_020827
CFAP97hsa-miR-3613-3p91.1242NM_020827
CFAP97hsa-miR-94490.5002NM_020827
CFAP97hsa-miR-942-5p90.465NM_020827
CFAP97hsa-miR-480389.351NM_020827
CFAP97hsa-miR-428289.0651NM_020827
CFAP97hsa-miR-467288.7519NM_020827
CFAP97hsa-miR-340-5p88.4768NM_020827
CFAP97hsa-miR-376a-3p88.3849NM_020827
CFAP97hsa-miR-376b-3p88.3849NM_020827
CFAP97hsa-miR-428788.2136NM_001292033
CFAP97hsa-miR-4685-3p88.2136NM_001292033
CFAP97hsa-miR-6516-5p88.1467NM_020827
CFAP97hsa-miR-314888.0618NM_001292033
CFAP97hsa-miR-316887.0243NM_020827
CFAP97hsa-miR-442786.5628NM_020827
CFAP97hsa-miR-30b-5p86.11NM_001292033
CFAP97hsa-miR-30e-5p86.11NM_001292033
CFAP97hsa-miR-30d-5p86.11NM_001292033
CFAP97hsa-miR-30c-5p86.11NM_001292033
CFAP97hsa-miR-30a-5p86.11NM_001292033
CFAP97hsa-miR-548c-3p85.5581NM_020827
CFAP97hsa-miR-6868-3p85.1083NM_020827
CFAP97hsa-miR-607484.5284NM_020827
CFAP97hsa-miR-576-5p84.2036NM_020827
CFAP97hsa-miR-182783.9323NM_001292033
CFAP97hsa-miR-42183.9162NM_001292033
CFAP97hsa-miR-154-5p82.8151NM_020827
CFAP97hsa-miR-397382.2118NM_020827
CFAP97hsa-miR-125382.0276NM_020827
CFAP97hsa-miR-468381.9395NM_001292033
CFAP97hsa-miR-410-3p81.8918NM_020827
CFAP97hsa-miR-6882-5p80.7186NM_020827
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Motifs and transcription factors (TFs) regulating CFAP97

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CFAP97metacluster_135.11NR2C2 (directAnnotation).
CFAP97metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
CFAP97metacluster_144.3ZNF704; ZNF704 (directAnnotation).
CFAP97metacluster_7.13ZFX (directAnnotation).
CFAP97cisbp__M00968MTF2 (directAnnotation).
CFAP97metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
CFAP97metacluster_160.20JUND; PRDM15 (directAnnotation).
CFAP97metacluster_198.3ZFP64 (directAnnotation).
CFAP97metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
CFAP97metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
CFAP97metacluster_61.1DEAF1; DEAF1 (directAnnotation).
CFAP97cisbp__M00788ZFY (inferredBy_Orthology).
CFAP97hdpi__ZNF304ZNF304 (directAnnotation).
CFAP97transfac_pro__M02844BCL6B (inferredBy_Orthology).
CFAP97metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
CFAP97metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
CFAP97transfac_pro__M01199TRIM28 (directAnnotation).
CFAP97kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
CFAP97metacluster_151.2ZNF23 (directAnnotation).
CFAP97transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
CFAP97transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
CFAP97transfac_pro__M03806ZBTB7C (directAnnotation).
CFAP97transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
CFAP97taipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
CFAP97metacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
CFAP97metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
CFAP97taipale_tf_pairs__ELF2_NATGCGGAAGTR_HTELF2 (directAnnotation).
CFAP97swissregulon__hs__ELF2ELF2 (directAnnotation).
CFAP97hdpi__ETV4ETV4 (directAnnotation).
CFAP97metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
CFAP97kznf__ZNF441_Imbeault2017_OM_RCADEZNF441 (directAnnotation).
CFAP97cisbp__M02645ETS1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."