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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: CDK2AP2

Summary for CDK2AP2

Gene informationGene symbol

CDK2AP2

Ensembl ID

ENSG00000167797

Entrez ID

10263

Gene namecyclin dependent kinase 2 associated protein 2
SynonymsDOC-1R|p14
Gene typeprotein_coding
UniProtAcc

O75956


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Dataset with differentially expressed gene: CDK2AP2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells-0.360650.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD8+ T cells-0.2708150.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreNK cells-0.3115116.71e-04

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells0.4144091.57e-36

GSE164237

patientsPeripheral blood mononuclear cellsMelanomaAdvanced stages of melanoma ImmunotherapypembrolizumabpreCD8+ T cells-0.2762290.00e+00

GSE197268_Tisa-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapytisa-cel (CAR-T)postNK cells-0.334680.00e+00

GSE197268_Tisa-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapytisa-cel (CAR-T)preNK cells0.3335773.26e-32

GSE197268_Tisa-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapytisa-cel (CAR-T)preCD8+ T cells0.3363180.00e+00

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells0.4999917.36e-26

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postpDCs-0.7536238.71e-05

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells0.7529410.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells0.4857790.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreCD8+ T cells-0.47454.95e-10

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.2876310.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3124921.65e-21

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells0.3054050.00e+00

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-0.2583390.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells-0.3565160.00e+00

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Expression of CDK2AP2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CDK2AP2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating CDK2AP2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CDK2AP2hsa-miR-451682.2549NM_001271849
CDK2AP2hsa-miR-4761-3p81.7434NM_001271849
CDK2AP2hsa-miR-444180.5155NM_001271849
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Motifs and transcription factors (TFs) regulating CDK2AP2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CDK2AP2metacluster_174.3MBD2; NFYA; NFYB; NFYC; PBX3 (directAnnotation).
CDK2AP2metacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
CDK2AP2transfac_pro__M04748GABPA (directAnnotation).
CDK2AP2metacluster_174.6NFYA; NFYB; NFYB; NFYC (directAnnotation).
CDK2AP2metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
CDK2AP2swissregulon__hs__SPI1SPI1 (directAnnotation).
CDK2AP2tfdimers__MD00561CRX (directAnnotation).
CDK2AP2transfac_pro__M01251E2F1 (directAnnotation).
CDK2AP2taipale_tf_pairs__ELK1_EVX1_RSCGGWANNNNYMATTA_CAP_reprELK1; EVX1 (directAnnotation).
CDK2AP2cisbp__M01815CEBPE (inferredBy_Orthology).
CDK2AP2transfac_pro__M06832PEG3 (directAnnotation).
CDK2AP2tfdimers__MD00367CDX2; IKZF1 (directAnnotation).
CDK2AP2transfac_pro__M07285ELF3 (directAnnotation).
CDK2AP2metacluster_183.3EHF; ELF3; FLI1; SPIB (directAnnotation). EHF; EHF; ELF2; ELF3; ELF4; ELF5; ERG; ERG; ETV3; ETV6; FLI1; SPI1; SPI1 (inferredBy_Orthology).
CDK2AP2metacluster_9.47PAX7 (inferredBy_Orthology).
CDK2AP2transfac_pro__M05990ZNF69 (directAnnotation).
CDK2AP2taipale_tf_pairs__ETV2_PITX1_RSCGGAANNNNNGGMTTAN_CAPETV2; PITX1 (directAnnotation).
CDK2AP2metacluster_111.6GMEB1; GMEB2 (directAnnotation).
CDK2AP2transfac_pro__M05708ZNF136 (directAnnotation).
CDK2AP2hocomoco__OTX1_HUMAN.H11MO.0.DOTX1 (directAnnotation).
CDK2AP2jaspar__MA0604.1ATF1 (inferredBy_Orthology).
CDK2AP2metacluster_79.18ZNF81; ZNF81 (directAnnotation).
CDK2AP2jaspar__MA1509.1IRF6 (directAnnotation).
CDK2AP2transfac_pro__M07385LHX2 (directAnnotation).
CDK2AP2taipale_tf_pairs__POU2F1_FOXO6_RMATATKCNNNNNNNNNNNNNRWMAACA_CAP_reprFOXO6; POU2F1 (directAnnotation).
CDK2AP2tfdimers__MD00078HOXD1; TCF7L1 (directAnnotation).
CDK2AP2transfac_pro__M02869HOXA3 (inferredBy_Orthology).
CDK2AP2transfac_pro__M01275PDX1 (directAnnotation).
CDK2AP2jaspar__MA1498.2HOXA7 (directAnnotation).
CDK2AP2hocomoco__HME2_HUMAN.H11MO.0.DEN2 (directAnnotation).
CDK2AP2transfac_public__M00137POU2F1 (directAnnotation).
CDK2AP2transfac_pro__M06952BATF (directAnnotation).
CDK2AP2metacluster_161.63HOXB8 (directAnnotation).
CDK2AP2transfac_pro__M02903SOX15 (inferredBy_Orthology).
CDK2AP2transfac_pro__M04616ISL1 (directAnnotation). LHX3 (inferredBy_Orthology).
CDK2AP2metacluster_130.18FOXD2; FOXD2 (directAnnotation). FOXA2; FOXD2; FOXD2 (inferredBy_Orthology).
CDK2AP2taipale_tf_pairs__HOXD4_NNYMATTANN_HTHOXD4 (directAnnotation).
CDK2AP2transfac_pro__M05838ZNF550 (directAnnotation).
CDK2AP2metacluster_161.13ISX (directAnnotation).
CDK2AP2transfac_pro__M06659ZSCAN10 (directAnnotation).
CDK2AP2tfdimers__MD00274MYCN (directAnnotation).
CDK2AP2transfac_pro__M03847SOX15 (directAnnotation).
CDK2AP2tfdimers__MD00140IRF1; OTX1; OTX2 (directAnnotation).
CDK2AP2taipale_tf_pairs__HOXB2_ELF1_NNYMATTANNNNNNNGGAAGNN_CAP_reprELF1; HOXB2 (directAnnotation).
CDK2AP2taipale_tf_pairs__GCM2_TBX21_NNNCGGGNNNGGTGTNN_CAP_reprGCM2; TBX21 (directAnnotation).
CDK2AP2tfdimers__MD00517POU5F1 (directAnnotation).
CDK2AP2tfdimers__MD00269CRX; PBX1 (directAnnotation).
CDK2AP2taipale_cyt_meth__TLX3_NAATTGNNNNNNNNNNCAATTN_FL_reprTLX3 (directAnnotation).
CDK2AP2transfac_pro__M06806PEG3 (directAnnotation).
CDK2AP2transfac_pro__M04906SIN3A (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."