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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: CD19

Summary for CD19

Gene informationGene symbol

CD19

Ensembl ID

ENSG00000177455

Entrez ID

930

Gene nameCD19 molecule
SynonymsNA
Gene typeprotein_coding
UniProtAcc

P15391


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Dataset with differentially expressed gene: CD19

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostB cells0.3261121.01e-07

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells-0.6352790.00e+00

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postB cells-0.7194651.88e-07

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Expression of CD19 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CD19

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

CD19

Aberration of the Drug's Therapeutic Target
Page: 1

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MicroRNAs (miRNA) regulating CD19

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CD19hsa-miR-848597.5464NM_001178098
CD19hsa-miR-4477b86.8248NM_001178098
CD19hsa-miR-4652-5p85.9157NM_001178098
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Motifs and transcription factors (TFs) regulating CD19

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CD19taipale_tf_pairs__ELF2_NATGCGGAAGTR_HTELF2 (directAnnotation).
CD19taipale_tf_pairs__HOXB2_SPDEF_ANCCGGATNNNNNNMATTA_CAP_reprHOXB2; SPDEF (directAnnotation).
CD19taipale_cyt_meth__LMX1A_CTCGTTAN_eDBD_methLMX1A (directAnnotation).
CD19transfac_pro__M06532ZNF461 (directAnnotation).
CD19jaspar__MA1952.1FOXJ2 (directAnnotation).
CD19swissregulon__mm__Elf3ELF3 (inferredBy_Orthology).
Page: 1

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
CD19"Axicabtagene ciloleucel"

DB13915

biotech
CD19"Blinatumomab"

DB09052

biotech
CD19"Brexucabtagene autoleucel"

DB15699

biotech
CD19"Coltuximab ravtansine"

DB06342

biotech
CD19"Depatuxizumab mafodotin"

DB11731

biotech
CD19"Inebilizumab"

DB12530

biotech
CD19"Lisocabtagene maraleucel"

DB16582

biotech
CD19"Loncastuximab tesirine"

DB16222

biotech
CD19"Tafasitamab"

DB15044

biotech
CD19"Tisagenlecleucel"

DB13881

biotech
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."

1Inotuzumab ozogamicin in pediatric patients with relapsed/refractory acute lymphoblastic leukemia Leukemia