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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: CCL2

Summary for CCL2

Gene informationGene symbol

CCL2

Ensembl ID

ENSG00000108691

Entrez ID

6347

Gene nameC-C motif chemokine ligand 2
SynonymsGDCF-2|HC11|MCAF|MCP-1|MCP1|MGC9434|SCYA2|SMC-CF
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: CCL2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostMono/Macro0.6030043.21e-13

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreMono/Macro1.674460.00e+00

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro1.295324.68e-06

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-1.885571.75e-26

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Expression of CCL2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CCL2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)
Gene symbolCell type with DEGInteraction IDInteracting pairGene AGene BIntegrinInteracting cell type1Interacting cell type2DatasetTimepointCondition
CCL2Mono/MacroCPI-SS0CF0E4DE9CCL2_CCR2CCL2CCR2FalseMono/MacropDCs

GSE169246_PacTissue

postsensitive
CCL2Mono/MacroCPI-SS0CF0E4DE9CCL2_CCR2CCL2CCR2FalseMono/MacroPlasma cells

GSE207422_Sin

postresistant
CCL2Mono/MacroCPI-SS0CF0E4DE9CCL2_CCR2CCL2CCR2FalseMono/MacropDCs

GSE207422_Sin

postresistant
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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

CCL2

Epigenetic Alteration of DNA, RNA or Protein

CCL2

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating CCL2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CCL2hsa-miR-452895.9495NM_002982
CCL2hsa-miR-684495.6024NM_002982
CCL2hsa-miR-3692-3p93.9531NM_002982
CCL2hsa-miR-664a-3p93.257NM_002982
CCL2hsa-miR-374a-5p91.5074NM_002982
CCL2hsa-miR-6783-5p91.4749NM_002982
CCL2hsa-let-7c-3p90.2951NM_002982
CCL2hsa-miR-374b-5p89.9252NM_002982
CCL2hsa-miR-20687.0847NM_002982
CCL2hsa-miR-1-3p87.0847NM_002982
CCL2hsa-miR-61386.3066NM_002982
CCL2hsa-miR-203a-5p84.7168NM_002982
CCL2hsa-miR-1277-5p81.0961NM_002982
CCL2hsa-miR-391081.0499NM_002982
CCL2hsa-miR-314380.6319NM_002982
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Motifs and transcription factors (TFs) regulating CCL2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CCL2kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
CCL2transfac_pro__M05542SNAPC4 (directAnnotation).
CCL2homer__GGAAATTCCC_NFkB-p65-RelRELA (inferredBy_Orthology).
CCL2transfac_pro__M06795ZNF780B (directAnnotation).
CCL2metacluster_22.39NFE2L2 (directAnnotation).
CCL2metacluster_22.12NFE2; NFE2L1 (directAnnotation).
CCL2transfac_pro__M01266ELF1 (directAnnotation).
CCL2taipale_tf_pairs__GCM2_SOX15_ATRCGGGYNNNNNYWTTGTNN_CAP_reprGCM2; SOX15 (directAnnotation).
CCL2transfac_pro__M05387ZNF653 (inferredBy_Orthology).
CCL2transfac_pro__M04887TCF12 (directAnnotation).
CCL2metacluster_22.13MAFK (inferredBy_Orthology).
CCL2kznf__ZNF547_Imbeault2017_OM_MEMEZNF547 (directAnnotation).
CCL2transfac_pro__M05612ZNF189 (directAnnotation).
CCL2transfac_public__M00208NFKB1; RELA (directAnnotation).
CCL2hocomoco__HSF1_HUMAN.H11MO.1.AHSF1 (directAnnotation).
CCL2taipale_tf_pairs__GCM1_CEBPB_ATRSGGGNNNNTTRCGYAAN_CAP_reprCEBPB; GCM1 (directAnnotation).
CCL2hdpi__TFAMTFAM (directAnnotation).
CCL2transfac_pro__M06072ZNF623 (directAnnotation).
CCL2tfdimers__MD00051GABPA; STAT6 (directAnnotation).
CCL2transfac_pro__M05985ZNF394 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
CCL2"Chondroitin sulfate"

DB09301

small molecule
CCL2"Danazol"

DB01406

small molecule
CCL2"Mimosine"

DB01055

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."

1Melatonin and inflammation-Story of a double-edged blade
2"Overcoming melanoma resistance to vemurafenib by targeting CCL2-induced miR-34a, miR-100 and miR-125b"