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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: CCDC68

Summary for CCDC68

Gene informationGene symbol

CCDC68

Ensembl ID

ENSG00000166510

Entrez ID

80323

Gene namecoiled-coil domain containing 68
SynonymsSE57-1
Gene typeprotein_coding
UniProtAcc

Q9H2F9


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Dataset with differentially expressed gene: CCDC68

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.4500650.00e+00

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Expression of CCDC68 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CCDC68

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating CCDC68

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CCDC68hsa-miR-590-3p99.071NM_025214
CCDC68hsa-miR-629-3p92.6866NM_025214
CCDC68hsa-miR-3681-5p92.5104NM_025214
CCDC68hsa-miR-430391.9738NM_001143829
CCDC68hsa-miR-6849-5p91.1951NM_025214
CCDC68hsa-miR-380-3p90.3986NM_025214
CCDC68hsa-miR-377-3p89.8372NM_025214
CCDC68hsa-miR-427188.9352NM_025214
CCDC68hsa-miR-391088.7944NM_025214
CCDC68hsa-miR-477588.3179NM_025214
CCDC68hsa-miR-6780b-5p87.7299NM_025214
CCDC68hsa-miR-4725-3p87.7299NM_025214
CCDC68hsa-miR-335-3p87.5962NM_025214
CCDC68hsa-miR-485-3p85.5658NM_025214
CCDC68hsa-miR-539-3p85.5658NM_025214
CCDC68hsa-miR-550a-5p85.173NM_025214
CCDC68hsa-miR-550a-3-5p85.173NM_025214
CCDC68hsa-miR-1271-3p85.173NM_025214
CCDC68hsa-miR-340-5p85.0803NM_001143829
CCDC68hsa-miR-4776-3p84.5728NM_025214
CCDC68hsa-miR-202-3p83.8754NM_025214
CCDC68hsa-miR-548bb-3p82.7996NM_025214
CCDC68hsa-miR-548d-3p82.7996NM_025214
CCDC68hsa-miR-548ac82.7996NM_025214
CCDC68hsa-miR-548z82.7996NM_025214
CCDC68hsa-miR-548h-3p82.7996NM_025214
CCDC68hsa-miR-126182.761NM_025214
CCDC68hsa-miR-6760-3p82.3785NM_025214
CCDC68hsa-miR-4724-3p81.5936NM_025214
CCDC68hsa-miR-4704-5p80.7581NM_025214
CCDC68hsa-miR-6886-3p80.6472NM_025214
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Motifs and transcription factors (TFs) regulating CCDC68

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CCDC68metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
CCDC68tfdimers__MD00038TFAP2C (directAnnotation).
CCDC68metacluster_144.3ZNF704; ZNF704 (directAnnotation).
CCDC68metacluster_7.13ZFX (directAnnotation).
CCDC68kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
CCDC68cisbp__M00968MTF2 (directAnnotation).
CCDC68metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
CCDC68metacluster_160.20JUND; PRDM15 (directAnnotation).
CCDC68metacluster_198.3ZFP64 (directAnnotation).
CCDC68metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
CCDC68metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
CCDC68metacluster_61.1DEAF1; DEAF1 (directAnnotation).
CCDC68cisbp__M00788ZFY (inferredBy_Orthology).
CCDC68metacluster_175.1ZNF283 (directAnnotation).
CCDC68hdpi__ZNF304ZNF304 (directAnnotation).
CCDC68transfac_pro__M02844BCL6B (inferredBy_Orthology).
CCDC68metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
CCDC68metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
CCDC68transfac_pro__M01199TRIM28 (directAnnotation).
CCDC68kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
CCDC68metacluster_151.2ZNF23 (directAnnotation).
CCDC68transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
CCDC68transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
CCDC68transfac_pro__M03806ZBTB7C (directAnnotation).
CCDC68transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."