Home

Download

Statistics

Landscape

Help

Contact

	Gene summary
	Datasets with differential expression of this gene
	Expression of this gene in the resistant group across all datasets and cell types
	Significant ligand-receptor pairs related to this gene (This gene does not contain this module)
	Known drug resistance mechanisms of this gene (This gene does not contain this module)
	MicroRNAs (miRNAs) regulating this gene
	Motifs and transcription factors (TFs) regulating this gene
	Acts as a transcription factor (This gene does not contain this module)
	Acts as a drug target< (This gene does not contain this module)

Gene: CCDC113

Summary for CCDC113

Gene information	Gene symbol	CCDC113
	Ensembl ID	ENSG00000103021
	Entrez ID	29070
	Gene name	coiled-coil domain containing 113
	Synonyms	DKFZp434N1418\|HSPC065
	Gene type	protein_coding
	UniProtAcc	NA

Top

Dataset with differentially expressed gene: CCDC113

Differentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.

Dataset	Source	Tissue	Cancer type level1	Cancer type level2	Drug type	Regimen	Timepoint	Cell type	avg_log2FC	p_val_adj
GSE140440	DU145 and PC cell lines	Cell line	Prostate cancer	Prostate cancer	Chemotherapy	docetaxel	NA	Malignant cells	1.24305	5.97e-03

Top

Expression of CCDC113 in the resistant group across all datasets and cell types

Red dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)

Top

Significant ligand-receptor pairs related to CCDC113

This table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

This table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

Top

MicroRNAs (miRNA) regulating CCDC113

This table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)

Gene symbol	miRNA	Score	GeneBank accession
CCDC113	hsa-miR-4755-3p	94.6098	NM_001142302
CCDC113	hsa-miR-6715a-3p	92.2406	NM_001142302
CCDC113	hsa-miR-5001-3p	91.9437	NM_001142302
CCDC113	hsa-miR-1909-5p	91.1741	NM_001142302
CCDC113	hsa-miR-4725-3p	83.4243	NM_001142302
CCDC113	hsa-miR-6780b-5p	83.4243	NM_001142302
CCDC113	hsa-miR-3162-5p	83.1893	NM_001142302
CCDC113	hsa-miR-203a-5p	82.7501	NM_001142302
CCDC113	hsa-miR-6825-5p	82.4408	NM_001142302
CCDC113	hsa-miR-32-5p	80.6873	NM_001142302
CCDC113	hsa-miR-92a-3p	80.6873	NM_001142302
CCDC113	hsa-miR-92b-3p	80.6873	NM_001142302
CCDC113	hsa-miR-4447	80.2025	NM_001142302

Page: 1

Top

Motifs and transcription factors (TFs) regulating CCDC113

This table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)

Gene symbol	motif	TF_highConf
CCDC113	taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_repr	GCM1; SPDEF (directAnnotation).

Page: 1

Top

Acts as a transcription factor

This table shows that this differential gene acts as a transcription factor.

Top

Acts as a drug target

This table shows that this differential gene acts as a drug target.

1	"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2	"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."