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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: CAPZB

Summary for CAPZB

Gene informationGene symbol

CAPZB

Ensembl ID

ENSG00000077549

Entrez ID

832

Gene namecapping actin protein of muscle Z-line subunit beta
SynonymsNA
Gene typeprotein_coding
UniProtAcc

P47756


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Dataset with differentially expressed gene: CAPZB

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.3374390.00e+00

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells-0.4049330.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD8+ T cells-0.2568750.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells-0.251222.42e-06

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelprecDCs0.2789241.83e-04

GSE197268_Axi-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyaxi-cel (CAR-T)postCD8+ T cells0.2958430.00e+00

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD8+ T cells0.2801890.00e+00

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells0.6021860.00e+00

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postB cells-0.9103234.94e-11

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells0.4970330.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostB cells0.9889121.98e-02

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD4+ T cells0.5466830.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreB cells-1.00291.91e-04

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreCD8+ T cells-0.4054691.25e-05

GSE111014

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaChronic lymphocytic leukemia (CLL)Targeted therapyibrutinibpostNK cells0.2848166.89e-10

GSE111014

patientsPeripheral blood mononuclear cellsChronic lymphocytic leukemiaChronic lymphocytic leukemia (CLL)Targeted therapyibrutinibpreCD4+ T cells-0.3750258.97e-03

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.2778444.26e-16

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.2712482.96e-09

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.5538590.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells0.6209390.00e+00

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-0.6735140.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells-0.5856970.00e+00

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Expression of CAPZB in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to CAPZB

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating CAPZB

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
CAPZBhsa-miR-4728-5p97.1678NM_001206540
CAPZBhsa-miR-6785-5p95.5916NM_001206540
CAPZBhsa-miR-428895.5337NM_001206540
CAPZBhsa-miR-627-3p95.003NM_001282162
CAPZBhsa-miR-6883-5p94.8288NM_001206540
CAPZBhsa-miR-149-3p94.8288NM_001206540
CAPZBhsa-miR-426393.8537NM_001282162
CAPZBhsa-miR-4633-5p93.3557NM_001206540
CAPZBhsa-miR-63293.1191NM_001206540
CAPZBhsa-miR-2467-5p92.3664NM_001206540
CAPZBhsa-miR-4802-5p90.3218NM_001206540
CAPZBhsa-miR-184390.3218NM_001206540
CAPZBhsa-miR-376a-2-5p89.9941NM_001282162
CAPZBhsa-miR-3688-3p89.0126NM_001206540
CAPZBhsa-miR-430687.5874NM_001282162
CAPZBhsa-miR-377-3p86.9882NM_001206540
CAPZBhsa-miR-444386.6008NM_001206540
CAPZBhsa-miR-451885.6115NM_001282162
CAPZBhsa-miR-1266-5p85.6115NM_001282162
CAPZBhsa-miR-444185.5339NM_001206540
CAPZBhsa-miR-428284.6174NM_001282162
CAPZBhsa-miR-3680-3p84.0832NM_001206540
CAPZBhsa-miR-205282.4924NM_001206540
CAPZBhsa-miR-329-3p80.8757NM_001206540
CAPZBhsa-miR-362-3p80.8757NM_001206540
CAPZBhsa-miR-3160-5p80.5578NM_001206540
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Motifs and transcription factors (TFs) regulating CAPZB

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
CAPZBswissregulon__hs__CHD1CHD1 (directAnnotation).
CAPZBmetacluster_174.3MBD2; NFYA; NFYB; NFYC; PBX3 (directAnnotation).
CAPZBmetacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
CAPZBtaipale_tf_pairs__ERF_FOXI1_RSCGGATGTTKWN_CAP_reprERF; FOXI1 (directAnnotation).
CAPZBtaipale_tf_pairs__ETV2_RFX5_NNNTTCCGSNNNNGCAACNN_CAP_reprETV2; RFX5 (directAnnotation).
CAPZBtaipale_tf_pairs__GCM1_ETV4_RTGCGGGCGGAAGTR_CAPETV4; GCM1 (directAnnotation).
CAPZBtfdimers__MD00210CDX2; HMBOX1 (directAnnotation).
CAPZBtransfac_pro__M04870HDAC2 (directAnnotation).
CAPZBtaipale_tf_pairs__TEAD4_SPIB_RGAATGCGGAAGTN_CAP_2SPIB; TEAD4 (directAnnotation).
CAPZBtfdimers__MD00554CUX1; EP300 (directAnnotation).
CAPZBtaipale_tf_pairs__ETV2_FOXO6_RCCGGATGTTKWN_CAPETV2; FOXO6 (directAnnotation).
CAPZBtaipale_tf_pairs__ETV2_GSC2_RSCGGAANNNNNGGATTA_CAP_reprETV2; GSC2 (directAnnotation).
CAPZBmetacluster_166.5ERG; ETV2; FLI1 (directAnnotation).
CAPZBtransfac_pro__M06257ZNF616 (directAnnotation).
CAPZBtaipale_tf_pairs__ETV2_PITX1_RSCGGAANNNNNGGMTTAN_CAPETV2; PITX1 (directAnnotation).
CAPZBmetacluster_168.11ZNF771; ZNF771 (directAnnotation).
CAPZBtaipale_tf_pairs__ERF_TBX21_TMACACCGGAAG_CAPERF; TBX21 (directAnnotation).
CAPZBmetacluster_111.6GMEB1; GMEB2 (directAnnotation).
CAPZBswissregulon__hs__ETV6ETV6 (directAnnotation).
CAPZBswissregulon__hs__GMEB2GMEB2 (directAnnotation).
CAPZBhomer__ACAGGATGTGGT_ETS_RUNXRUNX1 (directAnnotation).
CAPZBtaipale_tf_pairs__TEAD4_ETV4_RCCGGAAATRCC_CAPETV4; TEAD4 (directAnnotation).
CAPZBtransfac_pro__M04856BATF (directAnnotation).
CAPZBmetacluster_72.1ZNF423; ZNF423 (directAnnotation).
CAPZBmetacluster_155.33ZNF16; ZNF816 (directAnnotation).
CAPZBtfdimers__MD00007E2F1; IRF8 (directAnnotation).
CAPZBtaipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
CAPZBtransfac_pro__M05769ZNF48 (inferredBy_Orthology).
CAPZBswissregulon__hs__ZKSCAN3ZKSCAN3 (directAnnotation).
CAPZBtransfac_pro__M06263ZNF211 (directAnnotation).
CAPZBswissregulon__mm__Elf3ELF3 (inferredBy_Orthology).
CAPZBnitta__Ets98B_TTCCCC20NTA_KH_TAMCGGATGCN_m1_c3SPDEF (inferredBy_Orthology).
CAPZBtransfac_pro__M06488ZNF595 (directAnnotation).
CAPZBtransfac_pro__M06085ZNF26 (directAnnotation).
CAPZBmetacluster_175.5IRX3; TP53; TP53; TP53; TP53; TP53; TP53; TP53; TP53; TP53; TP53; TP63; TP63; TP63; TP63; TP63; TP63; TP73; TP73; TP73; TP73; TP73; TP73 (directAnnotation). TP53; TP53; TP53; TP73 (inferredBy_Orthology).
CAPZBtfdimers__MD00066ELF1 (directAnnotation).
CAPZBtaipale_tf_pairs__ETV2_SOX15_RSCGGAWNNNNNNACAATRN_CAP_reprETV2; SOX15 (directAnnotation).
CAPZBtransfac_pro__M06943PBX3 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."