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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: C15orf40

Summary for C15orf40

Gene informationGene symbol

C15orf40

Ensembl ID

ENSG00000169609

Entrez ID

123207

Gene namechromosome 15 open reading frame 40
SynonymsMGC29937
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: C15orf40

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.2622031.49e-16

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.4223750.00e+00

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Expression of C15orf40 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to C15orf40

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating C15orf40

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
C15orf40hsa-miR-7159-5p97.7198NM_144597
C15orf40hsa-miR-127096.9376NM_001160114
C15orf40hsa-miR-62096.9376NM_001160114
C15orf40hsa-miR-6827-3p95.7408NM_001160113
C15orf40hsa-miR-340-3p94.6856NM_001160113
C15orf40hsa-miR-479494.4041NM_144597
C15orf40hsa-miR-3065-5p94.3703NM_001160114
C15orf40hsa-miR-664a-5p93.5466NM_144597
C15orf40hsa-miR-477593.2525NM_144597
C15orf40hsa-miR-877-5p91.7902NM_001160114
C15orf40hsa-miR-412-3p91.2453NM_144597
C15orf40hsa-miR-616-5p91.2242NM_001160114
C15orf40hsa-miR-371b-5p91.2242NM_001160114
C15orf40hsa-miR-373-5p91.2242NM_001160114
C15orf40hsa-miR-570690.71NM_144597
C15orf40hsa-miR-4782-5p90.71NM_144597
C15orf40hsa-miR-130590.4687NM_001160114
C15orf40hsa-miR-7151-3p90.3811NM_144597
C15orf40hsa-miR-511-5p90.3413NM_001160116
C15orf40hsa-miR-3613-3p89.918NM_001160113
C15orf40hsa-miR-6754-3p89.5492NM_144597
C15orf40hsa-miR-4709-3p89.4605NM_001160116
C15orf40hsa-miR-5089-5p89.3373NM_144597
C15orf40hsa-miR-510-3p88.646NM_001160114
C15orf40hsa-let-7g-3p88.6091NM_001160116
C15orf40hsa-let-7a-2-3p88.6091NM_001160116
C15orf40hsa-miR-1213187.803NM_144597
C15orf40hsa-miR-4703-5p86.7299NM_144597
C15orf40hsa-miR-6882-5p85.8292NM_001160114
C15orf40hsa-miR-548c-3p85.2249NM_001160114
C15orf40hsa-miR-3942-5p85.0892NM_144597
C15orf40hsa-miR-4659a-3p83.9371NM_144597
C15orf40hsa-miR-4659b-3p83.9371NM_144597
C15orf40hsa-miR-224-3p83.7886NM_001160114
C15orf40hsa-miR-522-3p83.7886NM_001160114
C15orf40hsa-miR-453183.491NM_144597
C15orf40hsa-miR-797783.2962NM_144597
C15orf40hsa-miR-286182.4694NM_001160113
C15orf40hsa-miR-6773-3p82.1733NM_001160114
C15orf40hsa-miR-6500-3p81.3042NM_001160114
C15orf40hsa-miR-548x-3p81.0416NM_144597
C15orf40hsa-miR-548aj-3p81.0416NM_144597
C15orf40hsa-miR-4766-3p80.8937NM_144597
C15orf40hsa-miR-5011-5p80.4401NM_144597
C15orf40hsa-miR-319880.146NM_144597
C15orf40hsa-miR-430980.146NM_144597
C15orf40hsa-miR-4743-3p80.0983NM_001160114
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Motifs and transcription factors (TFs) regulating C15orf40

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
C15orf40metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
C15orf40metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
C15orf40metacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
C15orf40transfac_pro__M00652NRF1 (directAnnotation).
C15orf40hdpi__ETV4ETV4 (directAnnotation).
C15orf40metacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
C15orf40metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
C15orf40jaspar__MA0502.2NFYB (directAnnotation).
C15orf40metacluster_144.3ZNF704; ZNF704 (directAnnotation).
C15orf40cisbp__M01863ZNF711 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."