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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: BRCC3

Summary for BRCC3

Gene informationGene symbol

BRCC3

Ensembl ID

ENSG00000185515

Entrez ID

79184

Gene nameBRCA1/BRCA2-containing complex subunit 3
SynonymsBRCC36|C6.1A|CXorf53
Gene typeprotein_coding
UniProtAcc

P46736


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Dataset with differentially expressed gene: BRCC3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.4401370.00e+00

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.2934822.60e-12

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells0.2667677.42e-08

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Expression of BRCC3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to BRCC3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating BRCC3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
BRCC3hsa-miR-877-3p98.9656NM_024332
BRCC3hsa-miR-442493.2779NM_024332
BRCC3hsa-miR-463592.8686NM_024332
BRCC3hsa-miR-129492.0664NM_024332
BRCC3hsa-miR-998692.0664NM_024332
BRCC3hsa-miR-6881-3p90.9919NM_024332
BRCC3hsa-miR-335-3p90.6215NM_024332
BRCC3hsa-miR-579-3p90.5821NM_024332
BRCC3hsa-miR-664b-3p90.5821NM_024332
BRCC3hsa-miR-477588.3449NM_024332
BRCC3hsa-miR-126486.6342NM_024332
BRCC3hsa-miR-4659b-3p84.9354NM_024332
BRCC3hsa-miR-4659a-3p84.9354NM_024332
BRCC3hsa-miR-569684.2552NM_024332
BRCC3hsa-miR-6727-5p84.23NM_024332
BRCC3hsa-miR-383-5p83.3303NM_024332
BRCC3hsa-miR-518c-5p83.1536NM_024332
BRCC3hsa-miR-3191-5p81.3473NM_024332
BRCC3hsa-miR-125b-2-3p81.2581NM_024332
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Motifs and transcription factors (TFs) regulating BRCC3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
BRCC3taipale_tf_pairs__ETV5_FOXI1_RSCGGATGTTGN_CAPETV5; FOXI1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
BRCC3"Zinc acetate"

DB14487

small molecule
BRCC3"Zinc chloride"

DB14533

small molecule
BRCC3"Zinc sulfate, unspecified form"

DB14548

small molecule
BRCC3"Zinc"

DB01593

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."