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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: BPGM

Summary for BPGM

Gene informationGene symbol

BPGM

Ensembl ID

ENSG00000172331

Entrez ID

669

Gene namebisphosphoglycerate mutase
SynonymsNA
Gene typeprotein_coding
UniProtAcc

P07738


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Dataset with differentially expressed gene: BPGM

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAErythrocytes0.7197532.80e-44

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD8+ T cells-0.4004890.00e+00

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreErythrocytes0.4362232.21e-18

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.2994250.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes1.179690.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.2930283.88e-18

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Expression of BPGM in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to BPGM

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating BPGM

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
BPGMhsa-miR-214-5p92.5219NM_001724
BPGMhsa-miR-4704-3p89.0188NM_001724
BPGMhsa-miR-7108-5p88.4488NM_001724
BPGMhsa-miR-6866-3p86.4026NM_001724
BPGMhsa-miR-188-5p86.4026NM_001724
BPGMhsa-miR-4743-3p85.5548NM_001724
BPGMhsa-miR-3613-3p85.1885NM_001724
BPGMhsa-miR-432-5p84.9597NM_001724
BPGMhsa-miR-520f-5p84.5307NM_001724
BPGMhsa-miR-873-5p83.6592NM_001724
BPGMhsa-miR-453183.1693NM_001724
BPGMhsa-miR-6715a-3p80.8725NM_001724
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Motifs and transcription factors (TFs) regulating BPGM

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
BPGMmetacluster_174.3MBD2; NFYA; NFYB; NFYC; PBX3 (directAnnotation).
BPGMmetacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
BPGMtaipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
BPGMjaspar__MA1483.2ELF2 (directAnnotation).
BPGMmetacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
BPGMcisbp__M08198ELF1 (directAnnotation).
BPGMtaipale_tf_pairs__ETV5_HOXA2_RSCGGWAATKR_CAPETV5; HOXA2 (directAnnotation).
BPGMtaipale_tf_pairs__ETV2_HES7_RSCGGAANNNNNNCACGTGNN_CAP_reprETV2; HES7 (directAnnotation).
BPGMjaspar__MA0033.2FOXL1 (directAnnotation).
BPGMmetacluster_119.2CCNT2; GATA1; GATA1; GATA1; GATA1; GATA2; GATA2; GATA2; NCOA1; TAL1; TAL1; TAL1; TAL1; ZNF823 (directAnnotation). GATA1; TAL1; TAL1; TAL1; TAL1 (inferredBy_Orthology).
BPGMtaipale_tf_pairs__ERF_HES7_NCCGGAANNNNNNCACGYGNN_CAP_reprERF; HES7 (directAnnotation).
BPGMdbtfbs__ZNF157_HEK293_ENCSR564YYW_merged_N1ZNF157 (directAnnotation).
BPGMtransfac_pro__M03892RXRA; VDR (directAnnotation).
BPGMtfdimers__MD00046GATA1; GATA2; GATA3; GATA4; GATA5; GATA6; SMAD4 (directAnnotation).
BPGMtaipale__NR2F1_full_RRGGTCAN_reprNR2F1 (directAnnotation).
BPGMtfdimers__MD00275POU2F1; TFAP2A (directAnnotation).
BPGMmetacluster_79.33YBX1; YBX1; ZNF264 (directAnnotation).
BPGMmetacluster_27.6ZNF410; ZNF410 (directAnnotation).
BPGMtaipale_tf_pairs__ELK1_TBX21_TNRCACCGGAAGNN_CAP_reprELK1; TBX21 (directAnnotation).
BPGMtransfac_pro__M06500ZNF614 (directAnnotation).
BPGMtransfac_pro__M06398ZNF761 (directAnnotation).
BPGMhomer__AGRGGTCA_COUP-TFIINR2F2 (inferredBy_Orthology).
BPGMtaipale_tf_pairs__PITX1_FIGLA_TAATCCNNNNCASSTG_CAP_reprFIGLA; PITX1 (directAnnotation).
BPGMmetacluster_64.2NR2F2 (inferredBy_Orthology).
BPGMtransfac_pro__M05956BCL11B (directAnnotation).
BPGMtransfac_pro__M06641ZNF184 (directAnnotation).
BPGMtransfac_pro__M06435ZNF429 (directAnnotation).
BPGMmetacluster_93.4BCL6B (directAnnotation).
BPGMtaipale_tf_pairs__ERF_EOMES_TNTCACACCGGAAAT_CAPEOMES; ERF (directAnnotation).
BPGMtransfac_pro__M06600ZNF566 (directAnnotation).
BPGMjaspar__MA0185.1DEAF1 (inferredBy_Orthology).
BPGMkznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
BPGMtransfac_pro__M06408ZSCAN30 (directAnnotation).
BPGMmetacluster_5.1HIVEP1; HIVEP1; NFAT5; NFKB1; NFKB1; NFKB1; NFKB1; NFKB1; NFKB1; NFKB1; NFKB1; NFKB1; NFKB2; NFKB2; NFKB2; NFKB2; NFKB2; REL; REL; REL; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELB; RELB (directAnnotation). NFAT5; NFKB1; NFKB1; NFKB1; NFKB1; NFKB1; NFKB2; NFKB2; NFKB2; REL; REL; REL; REL; RELA; RELA; RELA; RELA; RELA; RELB; RELB; RELB (inferredBy_Orthology).
BPGMtransfac_pro__M06799ZSCAN12 (directAnnotation).
BPGMdbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
BPGMhocomoco__GMEB2_HUMAN.H11MO.0.DGMEB2 (directAnnotation).
BPGMmetacluster_141.2E2F2; E2F3 (directAnnotation).
BPGMtransfac_public__M00039CREB1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."