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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor

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Acts as a drug target< (This gene does not contain this module)

Gene: BHLHE41

Summary for BHLHE41

Gene informationGene symbol

BHLHE41

Ensembl ID

ENSG00000123095

Entrez ID

79365

Gene namebasic helix-loop-helix family member e41
SynonymsBHLHB3|DEC2|SHARP-1|SHARP1
Gene typeprotein_coding
UniProtAcc

Q9C0J9


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Dataset with differentially expressed gene: BHLHE41

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells2.789983.21e-05

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro-0.4774521.82e-14

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.2774250.00e+00

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepostMalignant cells0.3540870.00e+00

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepreMalignant cells0.4008280.00e+00

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Expression of BHLHE41 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to BHLHE41

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating BHLHE41

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
BHLHE41hsa-miR-432596.4729NM_030762
BHLHE41hsa-miR-1304-5p92.6872NM_030762
BHLHE41hsa-miR-6509-5p91.2872NM_030762
BHLHE41hsa-miR-442988.8499NM_030762
BHLHE41hsa-miR-4732-3p88.2277NM_030762
BHLHE41hsa-miR-3152-3p88.0456NM_030762
BHLHE41hsa-miR-532-5p88.0213NM_030762
BHLHE41hsa-miR-504-3p87.5567NM_030762
BHLHE41hsa-miR-94487.4398NM_030762
BHLHE41hsa-miR-548m87.4152NM_030762
BHLHE41hsa-miR-526b-3p87.0509NM_030762
BHLHE41hsa-miR-106b-5p86.3311NM_030762
BHLHE41hsa-miR-20a-5p86.3311NM_030762
BHLHE41hsa-miR-6749-3p85.8524NM_030762
BHLHE41hsa-miR-127585.2795NM_030762
BHLHE41hsa-miR-4665-5p85.2795NM_030762
BHLHE41hsa-miR-5590-3p84.8615NM_030762
BHLHE41hsa-miR-142-5p84.8615NM_030762
BHLHE41hsa-miR-320c84.8126NM_030762
BHLHE41hsa-miR-320a-3p84.8126NM_030762
BHLHE41hsa-miR-320d84.8126NM_030762
BHLHE41hsa-miR-320b84.8126NM_030762
BHLHE41hsa-miR-519d-3p84.3094NM_030762
BHLHE41hsa-miR-17-5p84.3094NM_030762
BHLHE41hsa-miR-20b-5p84.3094NM_030762
BHLHE41hsa-miR-93-5p84.3094NM_030762
BHLHE41hsa-miR-106a-5p84.3094NM_030762
BHLHE41hsa-miR-301b-3p83.4882NM_030762
BHLHE41hsa-miR-429583.4882NM_030762
BHLHE41hsa-miR-130b-3p83.4882NM_030762
BHLHE41hsa-miR-301a-3p83.4882NM_030762
BHLHE41hsa-miR-130a-3p83.4882NM_030762
BHLHE41hsa-miR-366683.4882NM_030762
BHLHE41hsa-miR-454-3p83.4882NM_030762
BHLHE41hsa-miR-5009-5p82.8149NM_030762
BHLHE41hsa-miR-146a-5p82.3262NM_030762
BHLHE41hsa-miR-146b-5p82.3262NM_030762
BHLHE41hsa-miR-7153-5p82.3262NM_030762
BHLHE41hsa-miR-888-5p81.2752NM_030762
BHLHE41hsa-miR-805880.2267NM_030762
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Motifs and transcription factors (TFs) regulating BHLHE41

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
BHLHE41metacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
BHLHE41transfac_pro__M07387ZBTB7A (directAnnotation).
BHLHE41transfac_pro__M07436WT1 (directAnnotation).
BHLHE41transfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
BHLHE41transfac_pro__M00716ZBTB14 (directAnnotation).
BHLHE41swissregulon__hs__CHD1CHD1 (directAnnotation).
BHLHE41taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
BHLHE41transfac_pro__M04893TAF1 (directAnnotation).
BHLHE41transfac_pro__M03876ZBTB33 (directAnnotation).
BHLHE41metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
BHLHE41transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
BHLHE41metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
BHLHE41transfac_pro__M06660ZNF670 (directAnnotation).
BHLHE41swissregulon__mm__Nkx2-3NKX2-3 (inferredBy_Orthology).
BHLHE41taipale_tf_pairs__GCM1_ETV4_RTGCGGGCGGAAGTR_CAPETV4; GCM1 (directAnnotation).
BHLHE41transfac_pro__M04722SPI1 (directAnnotation).
BHLHE41taipale_tf_pairs__ETV5_FOXI1_TGTTGNCGGAWRN_CAPETV5; FOXI1 (directAnnotation).
BHLHE41transfac_pro__M07399NKX6-1 (directAnnotation).
BHLHE41transfac_pro__M01425HNF1B (directAnnotation).
BHLHE41tfdimers__MD00145ELF1; ELF2; ELK1; ELK4; ERF; ERG; ETS1; ETS2; ETV7; FLI1; TCF7L2 (directAnnotation).
BHLHE41transfac_public__M00039CREB1 (directAnnotation).
BHLHE41homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
BHLHE41transfac_pro__M07329SP7 (directAnnotation).
BHLHE41hocomoco__EGR4_HUMAN.H11MO.0.DEGR4 (directAnnotation).
BHLHE41metacluster_3.14WT1; WT1 (directAnnotation).
BHLHE41transfac_pro__M01090SMAD9 (inferredBy_Orthology).
BHLHE41transfac_pro__M01837KLF11 (directAnnotation).
BHLHE41transfac_pro__M02844BCL6B (inferredBy_Orthology).
BHLHE41transfac_pro__M07310SP5 (directAnnotation).
BHLHE41swissregulon__hs__KLF6KLF6 (directAnnotation).
BHLHE41metacluster_3.4SP1; SP2; SP2; SP3 (directAnnotation).
BHLHE41cisbp__M00968MTF2 (directAnnotation).
BHLHE41transfac_pro__M04916TAF1 (directAnnotation).
BHLHE41kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
BHLHE41hocomoco__PROX1_HUMAN.H11MO.0.DPROX1 (directAnnotation).
BHLHE41transfac_pro__M01303SP1 (directAnnotation).
BHLHE41dbtfbs__ZFP91_K562_ENCSR898XMH_merged_N1ZFP91 (directAnnotation).
BHLHE41swissregulon__hs__SOX1SOX1 (directAnnotation).
BHLHE41jaspar__MA1633.2BACH1 (directAnnotation).
BHLHE41tfdimers__MD00097GABPA; PAX4 (directAnnotation).
BHLHE41transfac_pro__M06353ZNF782 (directAnnotation).
BHLHE41transfac_pro__M05538ZNF536 (inferredBy_Orthology).
BHLHE41transfac_pro__M06257ZNF616 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.
TFmotifExpressionCell typeDatasetTimepoint
BHLHE41metacluster_14.6upMalignant cells

GSE161801_IMiD

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."