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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: BCCIP

Summary for BCCIP

Gene informationGene symbol

BCCIP

Ensembl ID

ENSG00000107949

Entrez ID

56647

Gene nameBRCA2 and CDKN1A interacting protein
SynonymsBCCIPalpha|TOK-1
Gene typeprotein_coding
UniProtAcc

Q9P287


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Dataset with differentially expressed gene: BCCIP

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-1.126190.00e+00

GSE131984_Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)ChemotherapypaclitaxelNAMalignant cells0.3250861.29e-12

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.3680330.00e+00

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.4236812.58e-30

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.3901588.53e-17

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.3933048.02e-21

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells-0.3891818.64e-17

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Expression of BCCIP in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to BCCIP

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating BCCIP

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
BCCIPhsa-miR-597-5p96.5872NM_078469
BCCIPhsa-miR-4778-3p95.1974NM_078468
BCCIPhsa-miR-127-3p93.9156NM_078469
BCCIPhsa-miR-6511b-5p93.386NM_078469
BCCIPhsa-miR-6811-5p93.386NM_078469
BCCIPhsa-miR-442793.2478NM_078468
BCCIPhsa-miR-203a-3p93.1896NM_078469
BCCIPhsa-miR-7-2-3p92.0539NM_016567
BCCIPhsa-miR-7-1-3p92.0539NM_016567
BCCIPhsa-miR-468291.1024NM_078468
BCCIPhsa-miR-6760-3p90.6979NM_078468
BCCIPhsa-miR-612489.4925NM_078468
BCCIPhsa-miR-449088.4101NM_078468
BCCIPhsa-miR-6769a-3p88.1898NM_016567
BCCIPhsa-miR-374a-3p87.9433NM_016567
BCCIPhsa-miR-545-3p87.54NM_078469
BCCIPhsa-miR-4793-3p86.2776NM_078469
BCCIPhsa-miR-29a-3p86.1009NM_078469
BCCIPhsa-miR-29c-3p86.1009NM_078469
BCCIPhsa-miR-29b-3p86.1009NM_078469
BCCIPhsa-miR-7-5p86.0228NM_078469
BCCIPhsa-miR-451785.041NM_078469
BCCIPhsa-miR-93483.2432NM_078469
BCCIPhsa-miR-30e-3p83.2406NM_078468
BCCIPhsa-miR-30a-3p83.2406NM_078468
BCCIPhsa-miR-30d-3p83.2406NM_078468
BCCIPhsa-miR-4742-3p83.0851NM_078469
BCCIPhsa-miR-371a-5p82.8418NM_016567
BCCIPhsa-miR-582-3p82.3893NM_078468
BCCIPhsa-miR-6774-5p81.9594NM_078469
BCCIPhsa-miR-63581.9594NM_078469
BCCIPhsa-miR-4680-3p81.0675NM_078468
BCCIPhsa-miR-59280.8943NM_078469
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Motifs and transcription factors (TFs) regulating BCCIP

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
BCCIPmetacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
BCCIPjaspar__MA0748.2YY2 (directAnnotation).
BCCIPmetacluster_7.5PLAGL1; PLAGL1 (directAnnotation).
BCCIPtaipale_tf_pairs__ETV2_FOXO6_RCCGGATGTTKWN_CAPETV2; FOXO6 (directAnnotation).
BCCIPtaipale_tf_pairs__ETV2_DRGX_RSCGGAWRYATTA_CAP_reprDRGX; ETV2 (directAnnotation).
BCCIPtaipale_tf_pairs__TEAD4_ETV4_RCCGGAAATRCC_CAPETV4; TEAD4 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."